|
| MorphologicalFilter (OpenMS) |
| MRMAssay (OpenMS) |
| _Alloc_base (KDTree) | MRMDecoy (OpenMS) |
| _Base_iterator (KDTree) | MRMFeature (OpenMS) |
| _Bracket_accessor (KDTree) | MRMFeatureFilter (OpenMS) |
| _Iterator (KDTree) | MRMFeatureFinderScoring (OpenMS) |
| _Node (KDTree) | MRMFeatureOpenMS (OpenMS) |
| _Node_base (KDTree) | MRMFeaturePicker (OpenMS) |
| _Node_compare (KDTree) | MRMFeaturePickerFile (OpenMS) |
| _Region (KDTree) | MRMFeatureQC (OpenMS) |
|
| MRMFeatureQCFile (OpenMS) |
| MRMFragmentSelection (OpenMS) |
| AAcid_ (seqan) | MRMIonSeries (OpenMS) |
| AAIndex (OpenMS) | MRMMapping (OpenMS) |
| AASequence (OpenMS) | MRMRTNormalizer (OpenMS) |
| OPXLDataStructs::AASeqWithMass (OpenMS) | MRMScoring (OpenSwath) |
| OPXLDataStructs::AASeqWithMassComparator (OpenMS) | MRMTransitionGroup (OpenMS) |
| FuzzyStringComparator::AbortComparison (OpenMS) | MRMTransitionGroupPicker (OpenMS) |
| AbsoluteQuantitation (OpenMS) | MS1FeatureMerger (OpenMS) |
| AbsoluteQuantitationMethod (OpenMS) | MS1Signal (OpenMS) |
| AbsoluteQuantitationMethodFile (OpenMS) | RNPxlSearch::MS2AdductsOfSinglePrecursorAdduct |
| AbsoluteQuantitationStandards (OpenMS) | MS2ConsensusSpectrum (OpenMS) |
| AbsoluteQuantitationStandardsFile (OpenMS) | MS2Feature (OpenMS) |
| AccurateMassSearchEngine (OpenMS) | MS2File (OpenMS) |
| AccurateMassSearchResult (OpenMS) | MS2Fragment (OpenMS) |
| Acquisition (OpenMS) | MS2Info (OpenMS) |
| AcquisitionInfo (OpenMS) | MSChromatogram (OpenMS) |
| AcquisitionInfoVisualizer (OpenMS) | MSDataAggregatingConsumer (OpenMS) |
| AcquisitionVisualizer (OpenMS) | MSDataCachedConsumer (OpenMS) |
| AcqusHandler (OpenMS::Internal) | MSDataChainingConsumer (OpenMS) |
| AdaptedIdentity (seqan) | MSDataSqlConsumer (OpenMS) |
| Adduct (OpenMS) | MSDataStoringConsumer (OpenMS) |
| AdductInfo (OpenMS) | MSDataTransformingConsumer (OpenMS) |
| AhoCorasickAmbiguous (OpenMS) | MSDataWritingConsumer (OpenMS) |
| always_true (KDTree) | ProteinResolver::MSDGroup (OpenMS) |
| PepXMLFile::AminoAcidModification (OpenMS) | MSExperiment (OpenMS) |
| MzIdentMLDOMHandler::AnalysisSoftware (OpenMS::Internal) | ExperimentalDesign::MSFileSectionEntry (OpenMS) |
| MSQuantifications::AnalysisSummary (OpenMS) | MsInspectFile (OpenMS) |
| RNPxlSearch::AnnotatedHit | MSNumpressCoder (OpenMS) |
| SimpleSearchEngine::AnnotatedHit | MSPeak (OpenMS) |
| Annotation1DCaret (OpenMS) | MSPFile (OpenMS) |
| Annotation1DDistanceItem (OpenMS) | MSPGenericFile (OpenMS) |
| Annotation1DItem (OpenMS) | MSPGenericFile_friend (OpenMS) |
| Annotation1DPeakItem (OpenMS) | MSQuantifications (OpenMS) |
| Annotation1DTextItem (OpenMS) | MSSim (OpenMS) |
| Annotations1DContainer (OpenMS) | MSSpectrum (OpenMS) |
| AnnotationStatistics (OpenMS) | MultiGradient (OpenMS) |
| AreaIterator (OpenMS::Internal) | MultiGradientSelector (OpenMS) |
| AScore (OpenMS) | MultiplexClustering (OpenMS) |
| MSQuantifications::Assay (OpenMS) | MultiplexDeltaMasses (OpenMS) |
| AsymmetricStatistics (OpenMS::Math) | MultiplexDeltaMassesGenerator (OpenMS) |
| QcMLFile::Attachment (OpenMS) | MultiplexClustering::MultiplexDistance (OpenMS) |
| AverageLinkage (OpenMS) | MultiplexFilteredMSExperiment (OpenMS) |
| AveragePosition (OpenMS::Math) | MultiplexFilteredPeak (OpenMS) |
| AxisPainter (OpenMS) | MultiplexFiltering (OpenMS) |
| AxisTickCalculator (OpenMS) | MultiplexFilteringCentroided (OpenMS) |
| AxisWidget (OpenMS) | MultiplexFilteringProfile (OpenMS) |
|
| MultiplexIsotopicPeakPattern (OpenMS) |
| MultiplexSatelliteCentroided (OpenMS) |
| BackgroundControl (OpenMS) | MultiplexSatelliteProfile (OpenMS) |
| BackgroundIntensityBin (OpenMS) | mySqrt (OpenSwath) |
| Base64 (OpenMS) | MzDataFile (OpenMS) |
| BaseException (OpenMS::Exception) | MzDataHandler (OpenMS::Internal) |
| BaseFeature (OpenMS) | MzDataValidator (OpenMS::Internal) |
| BaseGroupFinder (OpenMS) | MzIdentMLDOMHandler (OpenMS::Internal) |
| BaseLabeler (OpenMS) | MzIdentMLFile (OpenMS) |
| BaseModel (OpenMS) | MzIdentMLHandler (OpenMS::Internal) |
| BaseSuperimposer (OpenMS) | MzIdentMLValidator (OpenMS::Internal) |
| BaseVisualizer (OpenMS) | Peak1D::MZLess (OpenMS) |
| BaseVisualizerGUI (OpenMS) | Peak2D::MZLess (OpenMS) |
| BasicStatistics (OpenMS::Math) | MSChromatogram::MZLess (OpenMS) |
| BernNorm (OpenMS) | MzMLFile (OpenMS) |
| BiGaussFitter1D (OpenMS) | MzMLHandler (OpenMS::Internal) |
| BiGaussModel (OpenMS) | MzMLHandlerHelper (OpenMS::Internal) |
| BilinearInterpolation (OpenMS::Math) | MzMLSpectrumDecoder (OpenMS) |
| MzMLHandlerHelper::BinaryData (OpenMS::Internal) | MzMLSqliteHandler (OpenMS::Internal) |
| BinaryDataArray (OpenMS::Interfaces) | MzMLSqliteSwathHandler (OpenMS::Internal) |
| BinaryTreeNode (OpenMS) | MzMLSwathFileConsumer (OpenMS) |
| EnzymaticDigestionLogModel::BindingSite_ (OpenMS) | MzMLValidator (OpenMS::Internal) |
| BinnedSharedPeakCount (OpenMS) | MzQuantMLFile (OpenMS) |
| BinnedSpectralContrastAngle (OpenMS) | MzQuantMLHandler (OpenMS::Internal) |
| BinnedSpectrum (OpenMS) | MzQuantMLValidator (OpenMS::Internal) |
| TargetedSpectraExtractor::BinnedSpectrumComparator (OpenMS) | MzTab (OpenMS) |
| BinnedSpectrumCompareFunctor (OpenMS) | MzTabAssayMetaData (OpenMS) |
| BinnedSumAgreeingIntensities (OpenMS) | MzTabBoolean (OpenMS) |
| BitsPerValue< AAcid > (seqan) | MzTabContactMetaData (OpenMS) |
| FeatureFinderAlgorithmIsotopeWavelet::BoxElement (OpenMS) | MzTabCVMetaData (OpenMS) |
| IsotopeWaveletTransform::BoxElement (OpenMS) | MzTabDouble (OpenMS) |
| BSpline (eol_bspline) | MzTabDoubleList (OpenMS) |
| BSpline2d (OpenMS) | MzTabFile (OpenMS) |
| BufferOverflow (OpenMS::Exception) | MzTabInstrumentMetaData (OpenMS) |
| Bzip2Ifstream (OpenMS) | MzTabInteger (OpenMS) |
| Bzip2InputStream (OpenMS) | MzTabIntegerList (OpenMS) |
|
| MzTabMetaData (OpenMS) |
| MzTabModification (OpenMS) |
| CachedmzML (OpenMS) | MzTabModificationList (OpenMS) |
| CachedMzMLHandler (OpenMS::Internal) | MzTabModificationMetaData (OpenMS) |
| CachedSwathFileConsumer (OpenMS) | MzTabMSRunMetaData (OpenMS) |
| CalibrationData (OpenMS) | MzTabNullAbleBase (OpenMS) |
| CentroidData (OpenMS) | MzTabNullAbleInterface (OpenMS) |
| CentroidPeak (OpenMS) | MzTabNullNaNAndInfAbleBase (OpenMS) |
| ItraqConstants::ChannelInfo (OpenMS) | MzTabNullNaNAndInfAbleInterface (OpenMS) |
| IsotopeCluster::ChargedIndexSet (OpenMS) | MzTabParameter (OpenMS) |
| ChargePair (OpenMS) | MzTabParameterList (OpenMS) |
| Chromatogram (OpenMS::Interfaces) | MzTabPeptideSectionRow (OpenMS) |
| MzMLHandler::ChromatogramData (OpenMS::Internal) | MzTabProteinSectionRow (OpenMS) |
| ChromatogramExtractor (OpenMS) | MzTabPSMSectionRow (OpenMS) |
| ChromatogramExtractorAlgorithm (OpenMS) | MzTabSampleMetaData (OpenMS) |
| ChromatogramMeta (OpenMS::Interfaces) | MzTabSmallMoleculeSectionRow (OpenMS) |
| ChromatogramPeak (OpenMS) | MzTabSoftwareMetaData (OpenMS) |
| ChromatogramSettings (OpenMS) | MzTabSpectraRef (OpenMS) |
| ChromatogramTools (OpenMS) | MzTabString (OpenMS) |
| ChromeleonFile (OpenMS) | MzTabStringList (OpenMS) |
| ChromExtractParams (OpenMS) | MzTabStudyVariableMetaData (OpenMS) |
| Citation (OpenMS) | MZTrafoModel (OpenMS) |
| EnzymaticDigestionLogModel::CleavageModel_ (OpenMS) | MzXMLFile (OpenMS) |
| OPXLDataStructs::CLSMScoreComparator (OpenMS) | MzXMLHandler (OpenMS::Internal) |
| ClusterAnalyzer (OpenMS) |
|
| ClusteredMS2ConsensusSpectrum (OpenMS) |
| ClusterFunctor (OpenMS) | SplineSpectrum::Navigator (OpenMS) |
| ClusterHierarchical (OpenMS) | NetworkGetRequest (OpenMS) |
| ClusteringGrid (OpenMS) | NeutralLossDiffFilter (OpenMS) |
| ClusterProxyKD (OpenMS) | NeutralLossMarker (OpenMS) |
| CmpHypothesesByScore (OpenMS) | NLargest (OpenMS) |
| CmpMassTraceByMZ (OpenMS) | SignalToNoiseEstimatorMedianRapid::NoiseEstimator (OpenMS) |
| CoarseIsotopePatternGenerator (OpenMS) | _Alloc_base::NoLeakAlloc (KDTree) |
| ColorSelector (OpenMS) | NonNegativeLeastSquaresSolver (OpenMS) |
| ConsensusMap::ColumnHeader (OpenMS) | NoopMSDataConsumer (OpenMS) |
| TargetedSpectraExtractor::Comparator (OpenMS) | NoopMSDataWritingConsumer (OpenMS) |
| MapAlignmentAlgorithmSpectrumAlignment::Compare (OpenMS) | Normalizer (OpenMS) |
| AccurateMassSearchEngine::CompareEntryAndMass_ (OpenMS) | FeatureFinderDefs::NoSuccessor (OpenMS) |
| CompareTypeImpl< AAcid, char > (seqan) | NotImplemented (OpenMS::Exception) |
| CompareTypeImpl< AAcid, uint8_t > (seqan) | NullPointer (OpenMS::Exception) |
| ComplementFilter (OpenMS) | MSNumpressCoder::NumpressConfig (OpenMS) |
| ComplementMarker (OpenMS) |
|
| CompleteLinkage (OpenMS) |
| CompNovoIdentification (OpenMS) | O18Labeler (OpenMS) |
| CompNovoIdentificationBase (OpenMS) | OfflinePrecursorIonSelection (OpenMS) |
| CompNovoIdentificationCID (OpenMS) | OMS_TranslateTableAAToChar_ (seqan) |
| CompNovoIonScoring (OpenMS) | OMS_TranslateTableByteToAA_ (seqan) |
| CompNovoIonScoringBase (OpenMS) | OMS_TranslateTableCharToAA_ (seqan) |
| CompNovoIonScoringCID (OpenMS) | OMSSACSVFile (OpenMS) |
| Compomer (OpenMS) | OMSSAXMLFile (OpenMS) |
| MRMFeatureQC::ComponentGroupPairQCs (OpenMS) | OnDiscMSExperiment (OpenMS) |
| MRMFeaturePicker::ComponentGroupParams (OpenMS) | OpenMSLineEdit (OpenMS::Internal) |
| MRMFeatureQC::ComponentGroupQCs (OpenMS) | OpenMSOSInfo (OpenMS::Internal) |
| MRMFeaturePicker::ComponentParams (OpenMS) | OpenSwath_Scores (OpenMS) |
| MRMFeatureQC::ComponentQCs (OpenMS) | OpenSwath_Scores_Usage (OpenMS) |
| Compound (OpenMS::TargetedExperimentHelper) | OpenSwathDataAccessHelper (OpenMS) |
| CompressedInputSource (OpenMS) | OpenSwathHelper (OpenMS) |
| ConfidenceScoring (OpenMS) | OpenSwathOSWWriter (OpenMS) |
| Configuration (OpenMS::TargetedExperimentHelper) | OpenSwathRetentionTimeNormalization (OpenMS) |
| ConnectedComponent (OpenMS) | OpenSwathScoring (OpenMS) |
| ConsensusFeature (OpenMS) | OpenSwathTSVWriter (OpenMS) |
| ConsensusIDAlgorithm (OpenMS) | OpenSwathWorkflow (OpenMS) |
| ConsensusIDAlgorithmAverage (OpenMS) | OpenSwathWorkflowBase (OpenMS) |
| ConsensusIDAlgorithmBest (OpenMS) | OpenSwathWorkflowSonar (OpenMS) |
| ConsensusIDAlgorithmIdentity (OpenMS) | MS1FeatureMerger::OPERATOR_FEATURE_TR (OpenMS) |
| ConsensusIDAlgorithmPEPIons (OpenMS) | LCMS::OPERATOR_FeatureCompare (OpenMS) |
| ConsensusIDAlgorithmPEPMatrix (OpenMS) | LCMS::OPERATOR_MZ (OpenMS) |
| ConsensusIDAlgorithmRanks (OpenMS) | OptimizePeakDeconvolution (OpenMS) |
| ConsensusIDAlgorithmSimilarity (OpenMS) | OptimizePick (OpenMS) |
| ConsensusIDAlgorithmWorst (OpenMS) | OptimizePick::OptPeakFunctor (OpenMS) |
| ConsensusIsotopePattern (OpenMS) | OPXLDataStructs (OpenMS) |
| ConsensusMap (OpenMS) | OPXLHelper (OpenMS) |
| ConsensusMapNormalizerAlgorithmMedian (OpenMS) | OPXLSpectrumProcessingAlgorithms (OpenMS) |
| ConsensusMapNormalizerAlgorithmQuantile (OpenMS) | OSBinaryDataArray (OpenSwath) |
| ConsensusMapNormalizerAlgorithmThreshold (OpenMS) | OSChromatogram (OpenSwath) |
| ConsensusXMLFile (OpenMS) | OSChromatogramMeta (OpenSwath) |
| ConsoleUtils (OpenMS) | OSSpectrum (OpenSwath) |
| HashGrid::ConstIterator (OpenMS) | OSSpectrumMeta (OpenSwath) |
| AASequence::ConstIterator (OpenMS) | OSWFile (OpenMS) |
| ConstRefVector (OpenMS) | OutOfGrid (OpenMS::Exception) |
| ConstRefVector::ConstRefVectorConstIterator (OpenMS) | OutOfMemory (OpenMS::Exception) |
| ConstRefVector::ConstRefVectorIterator (OpenMS) | OutOfRange (OpenMS::Exception) |
| Contact (OpenMS::TargetedExperimentHelper) |
|
| ContactPerson (OpenMS) |
| ContactPersonVisualizer (OpenMS) | PairComparatorFirstElement (OpenMS) |
| MSExperiment::ContainerAdd_ (OpenMS) | PairComparatorFirstElementMore (OpenMS) |
| MSExperiment::ContainerAdd_< ContainerValueType, false > (OpenMS) | PairComparatorSecondElement (OpenMS) |
| MSExperiment::ContainerAdd_< ContainerValueType, true > (OpenMS) | PairComparatorSecondElementMore (OpenMS) |
| RawMSSignalSimulation::ContaminantInfo (OpenMS) | PairMatcherFirstElement (OpenMS) |
| ContinuousWaveletTransform (OpenMS) | PairMatcherSecondElement (OpenMS) |
| ContinuousWaveletTransformNumIntegration (OpenMS) | PAM30MS (seqan) |
| ControlledVocabulary (OpenMS) | Param (OpenMS) |
| ConversionError (OpenMS::Exception) | ParamEditor (OpenMS) |
| ConvexHull2D (OpenMS) | ParamEditorDelegate (OpenMS::Internal) |
| CrossLinksDB (OpenMS) | Param::ParamEntry (OpenMS) |
| OPXLDataStructs::CrossLinkSpectrumMatch (OpenMS) | ParameterInformation (OpenMS) |
| CsiFingerIdMzTabWriter::CsiAdapterHit (OpenMS) | Param::ParamIterator (OpenMS) |
| CsiFingerIdMzTabWriter::CsiAdapterIdentification (OpenMS) | Param::ParamNode (OpenMS) |
| CsiFingerIdMzTabWriter::CsiAdapterRun (OpenMS) | ParamTree (OpenMS::Internal) |
| CsiFingerIdMzTabWriter (OpenMS) | ParamXMLFile (OpenMS) |
| CsvFile (OpenMS) | ParamXMLHandler (OpenMS::Internal) |
| CSVWriter (OpenSwath) | ParentPeakMower (OpenMS) |
| CubicSpline2d (OpenMS) | ParseError (OpenMS::Exception) |
| CumulativeBinomial (OpenMS::Math) | Pattern< TNeedle, FuzzyAC > (seqan) |
| CV (OpenMS::TargetedExperimentHelper) | PatternAuxData (seqan) |
| CVMappingFile (OpenMS) | IMSIsotopeDistribution::Peak (OpenMS::ims) |
| CVMappingRule (OpenMS) | Peak1D (OpenMS) |
| CVMappings (OpenMS) | Peak2D (OpenMS) |
| CVMappingTerm (OpenMS) | PeakAlignment (OpenMS) |
| CVReference (OpenMS) | PeptideHit::PeakAnnotation (OpenMS) |
| CVTerm (OpenMS) | PeakIntegrator::PeakArea (OpenMS) |
| ControlledVocabulary::CVTerm (OpenMS) | PeakPickerCWT::PeakArea_ (OpenMS) |
| SemanticValidator::CVTerm (OpenMS::Internal) | PeakIntegrator::PeakBackground (OpenMS) |
| CVTermList (OpenMS) | PeakPickerHiRes::PeakBoundary (OpenMS) |
| CVTermListInterface (OpenMS) | PeakCandidate (OpenMS) |
|
| PeakPickerMaxima::PeakCandidate (OpenMS) |
| PeakFileOptions (OpenMS) |
| EGHFitter1D::Data (OpenMS) | PeakIndex (OpenMS) |
| EmgFitter1D::Data (OpenMS) | PeakIntegrator (OpenMS) |
| OptimizePeakDeconvolution::Data (OpenMS) | PeakIntensityPredictor (OpenMS) |
| OptimizePick::Data (OpenMS) | PeakMarker (OpenMS) |
| TwoDOptimization::Data (OpenMS) | PeakPickerCWT (OpenMS) |
| MzIdentMLDOMHandler::DatabaseInput (OpenMS::Internal) | PeakPickerHiRes (OpenMS) |
| DataFilters::DataFilter (OpenMS) | PeakPickerIterative (OpenMS) |
| DataFilterDialog (OpenMS) | PeakPickerMaxima (OpenMS) |
| DataFilters (OpenMS) | PeakPickerMRM (OpenMS) |
| DataMatrix (OpenSwath) | PeakPickerSH (OpenMS) |
| TransformationModel::DataPoint (OpenMS) | PeakShape (OpenMS) |
| DataProcessing (OpenMS) | PeakIntegrator::PeakShapeMetrics (OpenMS) |
| DataProcessingVisualizer (OpenMS) | PeakSpectrumCompareFunctor (OpenMS) |
| DataValue (OpenMS) | PeakTypeEstimator (OpenMS) |
| Date (OpenMS) | PeakWidthEstimator (OpenMS) |
| DateTime (OpenMS) | PenaltyFactors (OpenMS::OptimizationFunctions) |
| DBoundingBox (OpenMS) | PenaltyFactorsIntensity (OpenMS::OptimizationFunctions) |
| MzIdentMLDOMHandler::DBSequence (OpenMS::Internal) | PepNovoInfile (OpenMS) |
| DeconvPeak (OpenMS) | PepNovoOutfile (OpenMS) |
| DefaultParamHandler (OpenMS) | Peptide (OpenSwath) |
| Deisotoper (OpenMS) | Peptide (OpenMS::TargetedExperimentHelper) |
| MultiplexDeltaMasses::DeltaMass (OpenMS) | PeptideAndProteinQuant (OpenMS) |
| DeNovoAlgorithm (OpenMS) | FeatureFinderIdentificationAlgorithm::PeptideCompare (OpenMS) |
| DeNovoIdentification (OpenMS) | PeptideCompound (OpenMS::TargetedExperimentHelper) |
| DeNovoIonScoring (OpenMS) | PeptideAndProteinQuant::PeptideData (OpenMS) |
| DeNovoPostScoring (OpenMS) | IDFilter::PeptideDigestionFilter (OpenMS) |
| DepletedIDPool (OpenMS::Exception) | ProteinResolver::PeptideEntry (OpenMS) |
| SvmTheoreticalSpectrumGenerator::DescriptorSet (OpenMS) | PeptideEvidence (OpenMS) |
| DetectabilitySimulation (OpenMS) | MzIdentMLDOMHandler::PeptideEvidence (OpenMS::Internal) |
| DiaPrescore (OpenMS) | PeptideHit (OpenMS) |
| DIAScoring (OpenMS) | PeptideHitVisualizer (OpenMS) |
| Digestion (OpenMS) | PeptideIdentification (OpenMS) |
| DigestionEnzyme (OpenMS) | PeptideIdentificationVisualizer (OpenMS) |
| DigestionEnzymeDB (OpenMS) | PeptideIndexing (OpenMS) |
| DigestionEnzymeProtein (OpenMS) | PeptideIndexing::PeptideProteinMatchInformation (OpenMS) |
| DigestionEnzymeRNA (OpenMS) | PeptideProteinResolution (OpenMS) |
| IDFilter::DigestionFilter (OpenMS) | PeptideHit::PepXMLAnalysisResult (OpenMS) |
| DigestionVisualizer (OpenMS) | PepXMLFile (OpenMS) |
| DigestSimulation (OpenMS) | PepXMLFileMascot (OpenMS) |
| DIntervalBase (OpenMS::Internal) | PercolatorFeatureSetHelper (OpenMS) |
| DistanceMatrix (OpenMS) | PercolatorOutfile (OpenMS) |
| FeatureDistance::DistanceParams_ (OpenMS) | CompNovoIdentificationBase::Permut (OpenMS) |
| DivisionByZero (OpenMS::Exception) | PlainMSDataWritingConsumer (OpenMS) |
| DocumentIdentifier (OpenMS) | PointerComparator (OpenMS) |
| DocumentIdentifierVisualizer (OpenMS) | PoseClusteringAffineSuperimposer (OpenMS) |
| DocumentIDTagger (OpenMS) | PoseClusteringShiftSuperimposer (OpenMS) |
| ListUtils::DoubleTolerancePredicate_ (OpenMS) | ChromatogramPeak::PositionLess (OpenMS) |
| DPeak (OpenMS) | PeakShape::PositionLess (OpenMS) |
| DPosition (OpenMS) | Peak1D::PositionLess (OpenMS) |
| DRange (OpenMS) | Peak2D::PositionLess (OpenMS) |
| DTA2DFile (OpenMS) | Postcondition (OpenMS::Exception) |
| DTAFile (OpenMS) | PosteriorErrorProbabilityModel (OpenMS::Math) |
|
| PrecisionWrapper (OpenMS) |
| Precondition (OpenMS::Exception) |
| EDTAFile (OpenMS) | Precursor (OpenMS) |
| EGHFitter1D (OpenMS) | PrecursorIonSelection (OpenMS) |
| EGHFitter1D::EGHFitterFunctor (OpenMS) | PrecursorIonSelectionPreprocessing (OpenMS) |
| EGHModel (OpenMS) | PrecursorMassComparator (OpenMS) |
| EGHTraceFitter (OpenMS) | PrecursorVisualizer (OpenMS) |
| EGHTraceFitter::EGHTraceFunctor (OpenMS) | Prediction (OpenMS::TargetedExperimentHelper) |
| EmgFitter1D::EgmFitterFunctor (OpenMS) | SimpleSVM::Prediction (OpenMS) |
| Element (OpenMS) | FuzzyStringComparator::PrefixInfo_ (OpenMS) |
| ElementDB (OpenMS) | OPXLDataStructs::PreprocessedPairSpectra (OpenMS) |
| ElementNotFound (OpenMS::Exception) | ProbablePhosphoSites (OpenMS) |
| ElutionModelFitter (OpenMS) | ProcessData (OpenMS) |
| ElutionPeakDetection (OpenMS) | Product (OpenMS) |
| EmgFitter1D (OpenMS) | ProductModel (OpenMS) |
| EmgGradientDescent (OpenMS) | ProductModel< 2 > (OpenMS) |
| EmgGradientDescent_friend (OpenMS) | ReactionMonitoringTransition::ProductMZLess (OpenMS) |
| EmgModel (OpenMS) | ProductVisualizer (OpenMS) |
| EmgScoring (OpenMS) | ProgressLogger (OpenMS) |
| EmpiricalFormula (OpenMS) | ProgressLogger::ProgressLoggerImpl (OpenMS) |
| XMLHandler::EndParsingSoftly (OpenMS::Internal) | ProteaseDB (OpenMS) |
| EnhancedTabBar (OpenMS) | ProteaseDigestion (OpenMS) |
| EnhancedTabBarWidgetInterface (OpenMS) | Protein (OpenMS::TargetedExperimentHelper) |
| EnhancedWorkspace (OpenMS) | Protein (OpenSwath) |
| EnzymaticDigestion (OpenMS) | PeptideAndProteinQuant::ProteinData (OpenMS) |
| EnzymaticDigestionLogModel (OpenMS) | ProteinResolver::ProteinEntry (OpenMS) |
| EqualInTolerance (OpenMS) | ProteinIdentification::ProteinGroup (OpenMS) |
| EuclideanSimilarity (OpenMS) | ProteinHit (OpenMS) |
| ExperimentalDesign (OpenMS) | ProteinHitVisualizer (OpenMS) |
| ExperimentalDesignFile (OpenMS) | ProteinIdentification (OpenMS) |
| ExperimentalSettings (OpenMS) | ProteinIdentificationVisualizer (OpenMS) |
| ExperimentalSettingsVisualizer (OpenMS) | ProteinInference (OpenMS) |
| ExtendedIsotopeFitter1D (OpenMS) | OPXLDataStructs::ProteinProteinCrossLink (OpenMS) |
| ExtendedIsotopeModel (OpenMS) | ProteinResolver (OpenMS) |
| ChromatogramExtractorAlgorithm::ExtractionCoordinates (OpenMS) | ProtonDistributionModel (OpenMS) |
|
| ProtXMLFile (OpenMS) |
| PScore (OpenMS) |
| Factory (OpenMS) | PSLPFormulation (OpenMS) |
| FactoryBase (OpenMS) | PSProteinInference (OpenMS) |
| FailedAPICall (OpenMS::Exception) | PTMXMLFile (OpenMS) |
| FakeProcess (OpenMS) | PTMXMLHandler (OpenMS::Internal) |
| FalseDiscoveryRate (OpenMS) | Publication (OpenMS::TargetedExperimentHelper) |
| FASTAContainer (OpenMS) | IsobaricChannelExtractor::PuritySate_ (OpenMS) |
| FASTAContainer< TFI_File > (OpenMS) |
|
| FASTAContainer< TFI_Vector > (OpenMS) |
| FASTAFile::FASTAEntry (OpenMS) | QApplication |
| FASTAFile (OpenMS) | QApplicationTOPP (OpenMS) |
| Feature (OpenMS) | QcMLFile (OpenMS) |
| FeatureFinderIdentificationAlgorithm::FeatureCompare (OpenMS) | QDate |
| AbsoluteQuantitationStandards::featureConcentration (OpenMS) | QDateTime |
| FeatureDeconvolution (OpenMS) | QDialog |
| FeatureDistance (OpenMS) | QFileSystemWatcher |
| FeatureEditDialog (OpenMS) | QGraphicsItem |
| FeatureFileOptions (OpenMS) | QGraphicsScene |
| FeatureFinderIdentificationAlgorithm::FeatureFilterPeptides (OpenMS) | QGraphicsView |
| FeatureFinderIdentificationAlgorithm::FeatureFilterQuality (OpenMS) | QItemDelegate |
| FeatureFinder (OpenMS) | QLineEdit |
| FeatureFinderAlgorithm (OpenMS) | QListWidget |
| FeatureFinderAlgorithmIsotopeWavelet (OpenMS) | QMainWindow |
| FeatureFinderAlgorithmMRM (OpenMS) | QMdiArea |
| FeatureFinderAlgorithmPicked (OpenMS) | QObject |
| FeatureFinderAlgorithmPickedHelperStructs (OpenMS) | QOpenGLFunctions_2_0 |
| FeatureFinderAlgorithmSH (OpenMS) | QOpenGLWidget |
| FeatureFinderAlgorithmSHCtrl (OpenMS) | QProcess |
| FeatureFinderDefs (OpenMS) | QTabBar |
| FeatureFinderIdentificationAlgorithm (OpenMS) | QTCluster (OpenMS) |
| FeatureFinderMultiplexAlgorithm (OpenMS) | QTClusterFinder (OpenMS) |
| FeatureFindingMetabo (OpenMS) | QTextEdit |
| FeatureGroupingAlgorithm (OpenMS) | QTreeWidget |
| FeatureGroupingAlgorithmKD (OpenMS) | QuadraticRegression (OpenMS::Math) |
| FeatureGroupingAlgorithmLabeled (OpenMS) | BaseFeature::QualityLess (OpenMS) |
| FeatureGroupingAlgorithmQT (OpenMS) | QcMLFile::QualityParameter (OpenMS) |
| FeatureGroupingAlgorithmUnlabeled (OpenMS) | QuantitativeExperimentalDesign (OpenMS) |
| FeatureHandle (OpenMS) | QWidget |
| FeatureHandle::FeatureHandleMutable_ (OpenMS) |
|
| FeatureHypothesis (OpenMS) |
| FeatureLCProfile (OpenMS) | RangeManager (OpenMS) |
| FeatureMap (OpenMS) | PeptideHit::RankLess (OpenMS) |
| FeatureMapping (OpenMS) | RANSAC (OpenMS::Math) |
| FeatureOpenMS (OpenMS) | RansacModel (OpenMS::Math) |
| FeatureMapping::FeatureToMs2Indices (OpenMS) | RansacModelLinear (OpenMS::Math) |
| FeatureXMLFile (OpenMS) | RansacModelQuadratic (OpenMS::Math) |
| IsotopeWavelet::fi_ (OpenMS) | RANSACParam (OpenMS::Math) |
| FidHandler (OpenMS::Internal) | RateScorePair |
| File (OpenMS) | ConsensusFeature::Ratio (OpenMS) |
| FileEmpty (OpenMS::Exception) | RawData (OpenMS) |
| FileHandler (OpenMS) | RawMSSignalSimulation (OpenMS) |
| FileMapping (OpenMS::Internal) | RawTandemMSSignalSimulation (OpenMS) |
| FileNameTooLong (OpenMS::Exception) | ReactionMonitoringTransition (OpenMS) |
| FileNotFound (OpenMS::Exception) | StringUtils::real_policies_NANfixed_ (OpenMS) |
| FileNotReadable (OpenMS::Exception) | RealMassDecomposer (OpenMS::ims) |
| FileNotWritable (OpenMS::Exception) | RegularSwathFileConsumer (OpenMS) |
| FileTypes (OpenMS) | Base64::Reinterpreter32_ (OpenMS) |
| FileWatcher (OpenMS) | Base64::Reinterpreter64_ (OpenMS) |
| FilterFunctor (OpenMS) | RequiredParameterNotGiven (OpenMS::Exception) |
| Fitter1D (OpenMS) | Residue (OpenMS) |
| FloatDataArray (OpenMS::DataArrays) | ResidueDB (OpenMS) |
| PeptideIndexing::FoundProteinFunctor (OpenMS) | ResidueModification (OpenMS) |
| RNPxlSearch::FragmentAdductDefinition_ | ProteinResolver::ResolverResult (OpenMS) |
| RNPxlFragmentAnnotationHelper::FragmentAnnotationDetail_ (OpenMS::Internal) | MorpheusScore::Result (OpenMS) |
| FTPeakDetectController (OpenMS) | RetentionTime (OpenMS::TargetedExperimentHelper) |
| FullSwathFileConsumer (OpenMS) | ReverseComparator (OpenMS) |
| FuzzyStringComparator (OpenMS) | RIALess |
|
| RichPeak2D (OpenMS) |
| RIntegration |
| GammaDistributionFitter::GammaDistributionFitResult (OpenMS::Math) | RNaseDB (OpenMS) |
| GammaDistributionFitter (OpenMS::Math) | RNaseDigestion (OpenMS) |
| GaussFilter (OpenMS) | RNPxlFragmentAnnotationHelper (OpenMS::Internal) |
| GaussFilterAlgorithm (OpenMS) | RNPxlSearch::RNPxlFragmentIonGenerator |
| GaussFitter::GaussFitResult (OpenMS::Math) | RNPxlMarkerIonExtractor (OpenMS) |
| GaussFitter (OpenMS::Math) | RNPxlModificationMassesResult (OpenMS) |
| GaussFitter1D (OpenMS) | RNPxlModificationsGenerator (OpenMS) |
| SignalToNoiseEstimator::GaussianEstimate (OpenMS) | RNPxlSearch::RNPxlParameterParsing |
| GaussModel (OpenMS) | RNPxlReport (OpenMS) |
| GaussTraceFitter (OpenMS) | RNPxlReportRow (OpenMS) |
| GaussTraceFitter::GaussTraceFunctor (OpenMS) | RNPxlReportRowHeader (OpenMS) |
| LevMarqFitter1D::GenericFunctor (OpenMS) | RNPxlSearch |
| TraceFitter::GenericFunctor (OpenMS) | ROCCurve (OpenMS::Math) |
| IDFilter::GetMatchingItems (OpenMS) | OSSpectrumMeta::RTLess (OpenSwath) |
| GlobalExceptionHandler (OpenMS::Exception) | MZTrafoModel::RTLess (OpenMS) |
| glp_prob | Peak2D::RTLess (OpenMS) |
| GoodDiffFilter (OpenMS) | ChromatogramPeak::RTLess (OpenMS) |
| Gradient (OpenMS) | MSSpectrum::RTLess (OpenMS) |
| GradientVisualizer (OpenMS) | FeatureFinderIdentificationAlgorithm::RTRegion (OpenMS) |
| GridBasedCluster (OpenMS) | RTSimulation (OpenMS) |
| GridBasedClustering (OpenMS) | AbsoluteQuantitationStandards::runConcentration (OpenMS) |
| GridFeature (OpenMS) | RWrapper (OpenMS) |
| GUIHelpers (OpenMS) |
|
| GUIProgressLoggerImpl (OpenMS) |
| GumbelDistributionFitter::GumbelDistributionFitResult (OpenMS::Math) | Sample (OpenMS) |
| GumbelDistributionFitter (OpenMS::Math) | ExperimentalDesign::SampleSection (OpenMS) |
| GzipIfstream (OpenMS) | SampleTreatment (OpenMS) |
| GzipInputStream (OpenMS) | SampleVisualizer (OpenMS) |
|
| SaveImageDialog (OpenMS) |
| SavitzkyGolayFilter (OpenMS) |
| HasActivationMethod (OpenMS) | Scaler (OpenMS) |
| IDFilter::HasDecoyAnnotation (OpenMS) | PSLPFormulation::ScanLess (OpenMS) |
| IDFilter::HasGoodScore (OpenMS) | ScanWindow (OpenMS) |
| HashGrid (OpenMS) | ScanWindowVisualizer (OpenMS) |
| IDFilter::HasMatchingAccession (OpenMS) | ProteinHit::ScoreLess (OpenMS) |
| IDFilter::HasMaxMetaValue (OpenMS) | PeptideHit::ScoreLess (OpenMS) |
| IDFilter::HasMaxRank (OpenMS) | PeptideHit::ScoreMore (OpenMS) |
| IDFilter::HasMetaValue (OpenMS) | ProteinHit::ScoreMore (OpenMS) |
| HasMetaValue (OpenMS) | ScoringMatrixData_< int, AminoAcid, AdaptedIdentity > (seqan) |
| IDFilter::HasNoHits (OpenMS) | ScoringMatrixData_< int, AminoAcid, PAM30MS > (seqan) |
| HasPrecursorCharge (OpenMS) | ProteinIdentification::SearchParameters (OpenMS) |
| HasScanMode (OpenMS) | FeatureFinderAlgorithmPickedHelperStructs::Seed (OpenMS) |
| HasScanPolarity (OpenMS) | SeedListGenerator (OpenMS) |
| HiddenMarkovModel (OpenMS) | SemanticValidator (OpenMS::Internal) |
| Histogram (OpenMS::Math) | PrecursorIonSelection::SeqTotalScoreMore (OpenMS) |
| HistogramDialog (OpenMS) | SequenceLess |
| HistogramWidget (OpenMS) | PeptideHit::SequenceLessComparator (OpenMS) |
| HMMState (OpenMS) | SequestInfile (OpenMS) |
| Host< Pattern< TNeedle, FuzzyAC > > (seqan) | SequestOutfile (OpenMS) |
| Host< Pattern< TNeedle, FuzzyAC > const > (seqan) | SHFeature (OpenMS) |
| HPLC (OpenMS) | SignalToNoiseEstimator (OpenMS) |
| HPLCVisualizer (OpenMS) | SignalToNoiseEstimatorMeanIterative (OpenMS) |
| HyperScore (OpenMS) | SignalToNoiseEstimatorMedian (OpenMS) |
|
| SignalToNoiseEstimatorMedianRapid (OpenMS) |
| SignalToNoiseOpenMS (OpenMS) |
| IBSpectraFile (OpenMS) | SILACLabeler (OpenMS) |
| IChromatogramsReader (OpenMS::Interfaces) | SimpleOpenMSSpectraFactory (OpenMS) |
| IChromatogramsWriter (OpenMS::Interfaces) | SimplePairFinder (OpenMS) |
| ICPLLabeler (OpenMS) | SimpleSearchEngine |
| IDataFrameWriter (OpenSwath) | SimpleSVM (OpenMS) |
| IDConflictResolverAlgorithm (OpenMS) | SimProtein (OpenMS::SimTypes) |
| IDDecoyProbability (OpenMS) | SimRandomNumberGenerator (OpenMS::SimTypes) |
| Identification (OpenMS) | ROCCurve::simsortdec (OpenMS::Math) |
| IdentificationHit (OpenMS) | SingleLinkage (OpenMS) |
| IDFilter (OpenMS) | SingletonRegistry (OpenMS) |
| IDMapper (OpenMS) | SIPIncorporation |
| IDRipper (OpenMS) | SIPPeptide |
| IdXMLFile (OpenMS) | SiriusMzTabWriter::SiriusAdapterHit (OpenMS) |
| InclusionExclusionList::IEWindow (OpenMS) | SiriusMzTabWriter::SiriusAdapterIdentification (OpenMS) |
| IFeature (OpenSwath) | SiriusMzTabWriter::SiriusAdapterRun (OpenMS) |
| IllegalArgument (OpenMS::Exception) | SiriusMSFile (OpenMS) |
| Map::IllegalKey (OpenMS) | SiriusMzTabWriter (OpenMS) |
| IllegalPosition (OpenMS::Exception) | SizeLess |
| IllegalSelfOperation (OpenMS::Exception) | ConsensusFeature::SizeLess (OpenMS) |
| IllegalTreeOperation (OpenMS::Exception) | SizeUnderflow (OpenMS::Exception) |
| ILPDCWrapper (OpenMS) | Software (OpenMS) |
| IMRMFeature (OpenSwath) | SoftwareVisualizer (OpenMS) |
| IMSAlphabet (OpenMS::ims) | LPWrapper::SolverParam (OpenMS) |
| IMSAlphabetParser (OpenMS::ims) | SONARScoring (OpenMS) |
| IMSAlphabetTextParser (OpenMS::ims) | SourceFile (OpenMS) |
| IMSDataConsumer (OpenMS::Interfaces) | SourceFileVisualizer (OpenMS) |
| IMSElement (OpenMS::ims) | Spawn (seqan) |
| IMSIsotopeDistribution (OpenMS::ims) | SpecArrayFile (OpenMS) |
| IncludeExcludeTarget (OpenMS) | SpectraMerger::SpectraDistance_ (OpenMS) |
| InclusionExclusionList (OpenMS) | IDMapper::SpectraIdentificationState (OpenMS) |
| IncompatibleIterators (OpenMS::Exception) | SpectraIdentificationViewWidget (OpenMS) |
| IndexedMzMLDecoder (OpenMS) | SpectralMatch (OpenMS) |
| IndexedMzMLFileLoader (OpenMS) | SpectralMatchScoreComparator (OpenMS) |
| IndexedMzMLHandler (OpenMS::Internal) | SpectraMerger (OpenMS) |
| PSLPFormulation::IndexLess (OpenMS) | SpectraSTSimilarityScore (OpenMS) |
| FeatureHandle::IndexLess (OpenMS) | SpectraViewWidget (OpenMS) |
| IndexOverflow (OpenMS::Exception) | Spectrum (OpenMS::Interfaces) |
| PSLPFormulation::IndexTriple (OpenMS) | Spectrum1DCanvas (OpenMS) |
| IndexUnderflow (OpenMS::Exception) | Spectrum1DGoToDialog (OpenMS) |
| INIFileEditorWindow (OpenMS) | Spectrum1DPrefDialog (OpenMS::Internal) |
| InIntensityRange (OpenMS) | Spectrum1DWidget (OpenMS) |
| INIUpdater (OpenMS) | Spectrum2DCanvas (OpenMS) |
| InMSLevelRange (OpenMS) | Spectrum2DGoToDialog (OpenMS) |
| InMzRange (OpenMS) | Spectrum2DPrefDialog (OpenMS::Internal) |
| InPrecursorMZRange (OpenMS) | Spectrum2DWidget (OpenMS) |
| FuzzyStringComparator::InputLine (OpenMS) | Spectrum3DCanvas (OpenMS) |
| InRTRange (OpenMS) | Spectrum3DOpenGLCanvas (OpenMS) |
| InspectInfile (OpenMS) | Spectrum3DPrefDialog (OpenMS::Internal) |
| InspectOutfile (OpenMS) | Spectrum3DWidget (OpenMS) |
| Instrument (OpenMS) | SpectrumAccessOpenMS (OpenMS) |
| Instrument (OpenMS::TargetedExperimentHelper) | SpectrumAccessOpenMSCached (OpenMS) |
| InstrumentSettings (OpenMS) | SpectrumAccessOpenMSInMemory (OpenMS) |
| InstrumentSettingsVisualizer (OpenMS) | SpectrumAccessQuadMZTransforming (OpenMS) |
| InstrumentVisualizer (OpenMS) | SpectrumAccessSqMass (OpenMS) |
| ClusterFunctor::InsufficientInput (OpenMS) | SpectrumAccessTransforming (OpenMS) |
| IntegerDataArray (OpenMS::DataArrays) | SpectrumAddition (OpenMS) |
| IntegerMassDecomposer (OpenMS::ims) | SpectrumAlignment (OpenMS) |
| IntensityBalanceFilter (OpenMS) | SpectrumAlignmentDialog (OpenMS) |
| IntensityIteratorWrapper (OpenMS::Internal) | SpectrumAlignmentScore (OpenMS) |
| ChromatogramPeak::IntensityLess (OpenMS) | SpectrumAnnotator (OpenMS) |
| Peak1D::IntensityLess (OpenMS) | SpectrumCanvas (OpenMS) |
| Peak2D::IntensityLess (OpenMS) | SpectrumCheapDPCorr (OpenMS) |
| InternalCalibration (OpenMS) | MzMLHandler::SpectrumData (OpenMS::Internal) |
| InterpolationModel (OpenMS) | MzXMLHandler::SpectrumData (OpenMS::Internal) |
| TransformationModelInterpolated::Interpolator (OpenMS) | SpectrumIdentification (OpenMS) |
| Interpretation (OpenMS::TargetedExperimentHelper) | MzIdentMLDOMHandler::SpectrumIdentification (OpenMS::Internal) |
| InvalidIterator (OpenMS::Exception) | MzIdentMLDOMHandler::SpectrumIdentificationProtocol (OpenMS::Internal) |
| InvalidParameter (OpenMS::Exception) | SpectrumLookup (OpenMS) |
| InvalidRange (OpenMS::Exception) | SpectrumMeta (OpenMS::Interfaces) |
| InvalidSize (OpenMS::Exception) | SpectrumMetaDataLookup::SpectrumMetaData (OpenMS) |
| InvalidValue (OpenMS::Exception) | SpectrumMetaDataLookup (OpenMS) |
| IOException (OpenMS::Exception) | SpectrumPrecursorComparator (OpenMS) |
| TOPPASToolVertex::IOInfo (OpenMS) | SpectrumSettings (OpenMS) |
| IonDetector (OpenMS) | SpectrumSettingsVisualizer (OpenMS) |
| IonDetectorVisualizer (OpenMS) | SpectrumWidget (OpenMS) |
| IonizationSimulation (OpenMS) | SplinePackage (OpenMS) |
| CompNovoIonScoringBase::IonScore (OpenMS) | SplineSpectrum (OpenMS) |
| DeNovoIonScoring::IonScore (OpenMS) | SqMassFile::SqMassConfig (OpenMS) |
| IonSource (OpenMS) | SqMassFile (OpenMS) |
| IonSourceVisualizer (OpenMS) | SqrtMower (OpenMS) |
| SvmTheoreticalSpectrumGenerator::IonType (OpenMS) | squared_difference (KDTree) |
| ProteinResolver::ISDGroup (OpenMS) | squared_difference_counted (KDTree) |
| IsEmptySpectrum (OpenMS) | StablePairFinder (OpenMS) |
| ISignalToNoise (OpenSwath) | PeptideAndProteinQuant::Statistics (OpenMS) |
| IsInCollisionEnergyRange (OpenMS) | SteinScottImproveScore (OpenMS) |
| IsInIsolationWindow (OpenMS) | StopWatch (OpenMS) |
| IsInIsolationWindowSizeRange (OpenMS) | FuzzyStringComparator::StreamElement_ (OpenMS) |
| IsobaricChannelExtractor (OpenMS) | StreamHandler (OpenMS) |
| IsobaricQuantitationMethod::IsobaricChannelInformation (OpenMS) | LogStreamBuf::StreamStruct (OpenMS::Logger) |
| IsobaricIsotopeCorrector (OpenMS) | String (OpenMS) |
| IsobaricNormalizer (OpenMS) | StringDataArray (OpenMS::DataArrays) |
| IsobaricQuantifier (OpenMS) | StringListUtils (OpenMS) |
| IsobaricQuantifierStatistics (OpenMS) | StringManager (OpenMS::Internal) |
| IsobaricQuantitationMethod (OpenMS) | StringUtils (OpenMS) |
| IsotopeCluster (OpenMS) | StringView (OpenMS) |
| IsotopeDiffFilter (OpenMS) | Summary (OpenMS) |
| IsotopeDistribution (OpenMS) | SummaryStatistics (OpenMS::Math) |
| IsotopeDistributionCache (OpenMS) | SuperHirnParameters (OpenMS) |
| IsotopeFitter1D (OpenMS) | SuperHirnUtil (OpenMS) |
| IsotopeMarker (OpenMS) | SVMData (OpenMS) |
| IsotopeModel (OpenMS) | SvmTheoreticalSpectrumGenerator::SvmModelParameterSet (OpenMS) |
| FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern (OpenMS) | SvmTheoreticalSpectrumGenerator (OpenMS) |
| IsotopePatternGenerator (OpenMS) | SvmTheoreticalSpectrumGeneratorSet (OpenMS) |
| IsotopeWavelet (OpenMS) | SvmTheoreticalSpectrumGeneratorTrainer (OpenMS) |
| IsotopeWaveletTransform (OpenMS) | SVMWrapper (OpenMS) |
| IsotopicDist (OpenMS) | SVOutStream (OpenMS) |
| ISpectraReader (OpenMS::Interfaces) | SwathFile (OpenMS) |
| ISpectraWriter (OpenMS::Interfaces) | SwathMap (OpenSwath) |
| ISpectrumAccess (OpenSwath) | SwathMapMassCorrection (OpenMS) |
| IsZoomSpectrum (OpenMS) | SwathWindowLoader (OpenMS) |
| HashGrid::Iterator (OpenMS) | SysInfo (OpenMS) |
| AASequence::Iterator (OpenMS) |
|
| ITransitionGroup (OpenSwath) |
| ItraqConstants (OpenMS) | Tagging (OpenMS) |
| ItraqEightPlexQuantitationMethod (OpenMS) | TaggingVisualizer (OpenMS) |
| ItraqFourPlexQuantitationMethod (OpenMS) | TargetedExperiment (OpenSwath) |
| ITRAQLabeler (OpenMS) | TargetedExperiment (OpenMS) |
|
| TargetedSpectraExtractor (OpenMS) |
| File::TemporaryFiles_ (OpenMS) |
| JavaInfo (OpenMS) | TextFile (OpenMS) |
|
| FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern (OpenMS) |
| TheoreticalSpectrumGenerationDialog (OpenMS) |
| KDTree (KDTree) | TheoreticalSpectrumGenerator (OpenMS) |
| KDTreeFeatureMaps (OpenMS) | TheoreticalSpectrumGeneratorXLMS (OpenMS) |
| KDTreeFeatureNode (OpenMS) | ThresholdMower (OpenMS) |
| KroenikFile (OpenMS) | TICFilter (OpenMS) |
|
| TMTElevenPlexQuantitationMethod (OpenMS) |
| TMTSixPlexQuantitationMethod (OpenMS) |
| MultiplexDeltaMassesGenerator::Label (OpenMS) | TMTTenPlexQuantitationMethod (OpenMS) |
| LabeledPairFinder (OpenMS) | TOFCalibration (OpenMS) |
| LabelFreeLabeler (OpenMS) | ToolDescription (OpenMS::Internal) |
| LayerData (OpenMS) | ToolDescriptionFile (OpenMS) |
| LayerStatisticsDialog (OpenMS) | ToolDescriptionHandler (OpenMS::Internal) |
| LCElutionPeak (OpenMS) | ToolDescriptionInternal (OpenMS::Internal) |
| LCMS (OpenMS) | ToolExternalDetails (OpenMS::Internal) |
| LCMSCData (OpenMS) | ToolHandler (OpenMS) |
| LevMarqFitter1D (OpenMS) | ToolsDialog (OpenMS) |
| LexicographicComparator (OpenMS) | TOPPASBase (OpenMS) |
| LibSVMEncoder (OpenMS) | TOPPASEdge (OpenMS) |
| LightCompound (OpenSwath) | TOPPASVertex::TOPPASFilenames (OpenMS) |
| LightModification (OpenSwath) | TOPPASInputFileDialog (OpenMS) |
| LightProtein (OpenSwath) | TOPPASInputFileListVertex (OpenMS) |
| LightTargetedExperiment (OpenSwath) | TOPPASInputFilesDialog (OpenMS) |
| LightTransition (OpenSwath) | TOPPASIOMappingDialog (OpenMS) |
| LinearInterpolation (OpenMS::Math) | TOPPASLogWindow (OpenMS) |
| LinearRegression (OpenMS::Math) | TOPPASMergerVertex (OpenMS) |
| LinearRegressionWithoutIntercept (OpenMS::Math) | TOPPASOutputFileListVertex (OpenMS) |
| LinearResampler (OpenMS) | TOPPASOutputFilesDialog (OpenMS) |
| LinearResamplerAlign (OpenMS) | TOPPASResource (OpenMS) |
| ListEditor (OpenMS) | TOPPASResources (OpenMS) |
| ListEditorDelegate (OpenMS::Internal) | TOPPASScene (OpenMS) |
| ListTable (OpenMS::Internal) | TOPPASSplitterVertex (OpenMS) |
| ListUtils (OpenMS) | TOPPASTabBar (OpenMS) |
| LocalLinearMap::LLMParam (OpenMS) | TOPPASToolConfigDialog (OpenMS) |
| LocalLinearMap (OpenMS) | TOPPASToolVertex (OpenMS) |
| InternalCalibration::LockMass (OpenMS) | TOPPASTreeView (OpenMS) |
| LogStreamBuf::LogCacheStruct (OpenMS::Logger) | TOPPASVertex (OpenMS) |
| LogConfigHandler (OpenMS) | TOPPASVertexNameDialog (OpenMS) |
| LogStream (OpenMS::Logger) | TOPPASWidget (OpenMS) |
| LogStreamBuf (OpenMS::Logger) | TOPPBase (OpenMS) |
| LogStreamNotifier (OpenMS::Logger) | TOPPMetaProSIP |
| TheoreticalSpectrumGeneratorXLMS::LossMass (OpenMS) | TOPPOpenPepXL |
| TheoreticalSpectrumGeneratorXLMS::LossMassComparator (OpenMS) | TOPPOpenPepXLLF |
| LowessSmoothing (OpenMS) | TOPPASScene::TOPPProcess (OpenMS) |
| LPWrapper (OpenMS) | TOPPViewBase (OpenMS) |
| PercolatorFeatureSetHelper::lq_PeptideEvidence (OpenMS) | TOPPViewIdentificationViewBehavior (OpenMS) |
| PercolatorFeatureSetHelper::lq_ProteinHit (OpenMS) | TOPPViewOpenDialog (OpenMS) |
|
| TOPPViewPrefDialog (OpenMS::Internal) |
| TOPPViewSpectraViewBehavior (OpenMS) |
| Map (OpenMS) | PrecursorIonSelection::TotalScoreMore (OpenMS) |
| MapAlignmentAlgorithmIdentification (OpenMS) | TraceFitter (OpenMS) |
| MapAlignmentAlgorithmKD (OpenMS) | Param::ParamIterator::TraceInfo (OpenMS) |
| MapAlignmentAlgorithmPoseClustering (OpenMS) | TraMLFile (OpenMS) |
| MapAlignmentAlgorithmSpectrumAlignment (OpenMS) | TraMLHandler (OpenMS::Internal) |
| MapAlignmentEvaluationAlgorithm (OpenMS) | TraMLProduct (OpenMS::TargetedExperimentHelper) |
| MapAlignmentEvaluationAlgorithmPrecision (OpenMS) | TraMLValidator (OpenMS::Internal) |
| MapAlignmentEvaluationAlgorithmRecall (OpenMS) | IDDecoyProbability::Transformation_ (OpenMS) |
| MapAlignmentTransformer (OpenMS) | TransformationDescription (OpenMS) |
| MapConversion (OpenMS) | TransformationModel (OpenMS) |
| AccurateMassSearchEngine::MappingEntry_ (OpenMS) | TransformationModelBSpline (OpenMS) |
| MappingParam (OpenMS::Internal) | TransformationModelInterpolated (OpenMS) |
| ConsensusFeature::MapsLess (OpenMS) | TransformationModelLinear (OpenMS) |
| MarkerMower (OpenMS) | TransformationModelLowess (OpenMS) |
| MascotGenericFile (OpenMS) | TransformationXMLFile (OpenMS) |
| MascotInfile (OpenMS) | TransitionGroupOpenMS (OpenMS) |
| MascotRemoteQuery (OpenMS) | TransitionHelper (OpenSwath) |
| MascotXMLFile (OpenMS) | TransitionPQPFile (OpenMS) |
| MascotXMLHandler (OpenMS::Internal) | TransitionTSVFile (OpenMS) |
| MassAnalyzer (OpenMS) | IsotopeWaveletTransform::TransSpectrum (OpenMS) |
| MassAnalyzerVisualizer (OpenMS) | TransitionTSVFile::TSVTransition (OpenMS) |
| MassDecomposer (OpenMS::ims) | TwoDOptimization::TwoDOptFunctor (OpenMS) |
| MassDecomposition (OpenMS) | TwoDOptimization (OpenMS) |
| MassDecompositionAlgorithm (OpenMS) |
|
| MassExplainer (OpenMS) |
| IMSAlphabet::MassSortingCriteria_ (OpenMS::ims) | UnableToCalibrate (OpenMS::Exception) |
| FeatureFinderAlgorithmPickedHelperStructs::MassTrace (OpenMS) | UnableToCreateFile (OpenMS::Exception) |
| MassTrace (OpenMS) | UnableToFit (OpenMS::Exception) |
| MasstraceCorrelator (OpenMS) | UnimodXMLFile (OpenMS) |
| MassTraceDetection (OpenMS) | UnimodXMLHandler (OpenMS::Internal) |
| FeatureFinderAlgorithmPickedHelperStructs::MassTraces (OpenMS) | UniqueIdGenerator (OpenMS) |
| TargetedSpectraExtractor::Match (OpenMS) | UniqueIdIndexer (OpenMS) |
| Matrix (OpenMS) | UniqueIdInterface (OpenMS) |
| MaxLikeliFitter1D (OpenMS) | CVTerm::Unit (OpenMS) |
| mean_and_stddev (OpenSwath) | UnnormalizedComparator (OpenMS) |
| SysInfo::MemUsage (OpenMS) | UnregisteredParameter (OpenMS::Exception) |
| MetaboliteFeatureDeconvolution (OpenMS) | UpdateCheck (OpenMS) |
| MetaboliteSpectralMatching (OpenMS) |
|
| MetaDataBrowser (OpenMS) |
| MetaInfo (OpenMS) | ValueSize< AAcid > (seqan) |
| MetaInfoDescription (OpenMS) | PSLPFormulation::VariableIndexLess (OpenMS) |
| MetaInfoDescriptionVisualizer (OpenMS) | VersionInfo::VersionDetails (OpenMS) |
| MetaInfoInterface (OpenMS) | VersionInfo (OpenMS) |
| MetaInfoInterfaceUtils (OpenMS) | TOPPASVertex::VertexRoundPackage (OpenMS) |
| MetaInfoRegistry (OpenMS) |
|
| MetaInfoVisualizer (OpenMS) |
| MetaProSIPClustering | Weights (OpenMS::ims) |
| MetaProSIPDecomposition | WeightWrapper (OpenMS) |
| MetaProSIPInterpolation | InclusionExclusionList::WindowDistance_ (OpenMS) |
| MetaProSIPReporting | WindowMower (OpenMS) |
| MetaProSIPXICExtraction | WrongParameterType (OpenMS::Exception) |
| LayerStatisticsDialog::MetaStatsValue_ (OpenMS) |
|
| MinimumDistance (OpenMS) |
| MissingInformation (OpenMS::Exception) | XCorrArrayType (OpenSwath::Scoring) |
| MockFeature (OpenSwath) | OPXLDataStructs::XLPrecursor (OpenMS) |
| MockMRMFeature (OpenSwath) | OPXLDataStructs::XLPrecursorComparator (OpenMS) |
| MockSignalToNoise (OpenSwath) | XMassFile (OpenMS) |
| MockTransitionGroup (OpenSwath) | XMLFile (OpenMS::Internal) |
| TraceFitter::ModelData (OpenMS) | XMLHandler (OpenMS::Internal) |
| ModelDescription (OpenMS) | XMLValidator (OpenMS) |
| Modification (OpenMS) | XQuestResultXMLFile (OpenMS) |
| Peptide::Modification (OpenMS::TargetedExperimentHelper) | XQuestResultXMLHandler (OpenMS::Internal) |
| ModificationDefinition (OpenMS) | XQuestScores (OpenMS) |
| ModificationDefinitionsSet (OpenMS) | XTandemInfile (OpenMS) |
| MzIdentMLDOMHandler::ModificationParam (OpenMS::Internal) | XTandemXMLFile (OpenMS) |
| ModificationsDB (OpenMS) |
|
| ModificationVisualizer (OpenMS) |
| ModifiedPeptideGenerator (OpenMS) | ZhangSimilarityScore (OpenMS) |
| MorpheusScore (OpenMS) | ZlibCompression (OpenMS) |
| |
1.8.14