MRMFeatureOpenMS Class Reference

An implementation of the OpenSWATH MRM Feature Access interface using OpenMS. More...

#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h>

Inheritance diagram for MRMFeatureOpenMS:

Public Member Functions
	MRMFeatureOpenMS (MRMFeature &mrmfeature)
	~MRMFeatureOpenMS ()
boost::shared_ptr< OpenSwath::IFeature >	getFeature (std::string nativeID)
boost::shared_ptr< OpenSwath::IFeature >	getPrecursorFeature (std::string nativeID)
std::vector< std::string >	getNativeIDs () const
std::vector< std::string >	getPrecursorIDs () const
float	getIntensity ()
double	getRT ()
size_t	size ()
Public Member Functions inherited from IMRMFeature
virtual	~IMRMFeature ()

Private Attributes
const MRMFeature &	mrmfeature_
std::map< std::string, boost::shared_ptr< FeatureOpenMS > >	features_
std::map< std::string, boost::shared_ptr< FeatureOpenMS > >	precursor_features_

Detailed Description

An implementation of the OpenSWATH MRM Feature Access interface using OpenMS.

Constructor & Destructor Documentation

MRMFeatureOpenMS()

MRMFeatureOpenMS ( MRMFeature &  mrmfeature )

explicit

~MRMFeatureOpenMS()

~MRMFeatureOpenMS

(

)

Member Function Documentation

getFeature()

boost::shared_ptr<OpenSwath::IFeature> getFeature ( std::string  nativeID )

virtual

Implements IMRMFeature.

getIntensity()

float getIntensity ( )

virtual

Implements IMRMFeature.

getNativeIDs()

std::vector<std::string> getNativeIDs ( ) const

virtual

Implements IMRMFeature.

getPrecursorFeature()

boost::shared_ptr<OpenSwath::IFeature> getPrecursorFeature ( std::string  nativeID )

virtual

Implements IMRMFeature.

getPrecursorIDs()

std::vector<std::string> getPrecursorIDs ( ) const

virtual

Implements IMRMFeature.

getRT()

double getRT ( )

virtual

Implements IMRMFeature.

size()

size_t size ( )

virtual

Implements IMRMFeature.

Member Data Documentation

features_

std::map<std::string, boost::shared_ptr<FeatureOpenMS> > features_

private

mrmfeature_

const MRMFeature& mrmfeature_

private

precursor_features_

std::map<std::string, boost::shared_ptr<FeatureOpenMS> > precursor_features_

private