Get scores from ID structures for FDR

Fills the scores_labels vector from an ID data structure. More...

Functions
static void	getScores_ (ScoreToTgtDecLabelPairs &scores_labels, const std::vector< ProteinIdentification::ProteinGroup > &grps, const std::unordered_set< std::string > &decoy_accs)
template<class ... Args>
static void	getScores_ (ScoreToTgtDecLabelPairs &scores_labels, const std::vector< PeptideIdentification > &ids, Args &&... args)
static void	getScores_ (ScoreToTgtDecLabelPairs &scores_labels, const ProteinIdentification &id)
template<class ... Args>
static void	getScores_ (ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, bool all_hits, Args &&... args)
template<typename IDPredicate , class ... Args>
static void	getScores_ (ScoreToTgtDecLabelPairs &scores_labels, const PeptideIdentification &id, IDPredicate &&fun, bool all_hits, Args &&... args)
template<typename HitPredicate >
static void	getScores_ (ScoreToTgtDecLabelPairs &scores_labels, const PeptideHit &hit, HitPredicate &&fun)
template<typename HitType , typename std::enable_if< IsHitType< HitType >::value >::type * = nullptr>
static void	getScores_ (ScoreToTgtDecLabelPairs &scores_labels, const HitType &hit)

Detailed Description

Fills the scores_labels vector from an ID data structure.

Parameters

scores_labels

Pairs of scores and boolean target decoy labels to be filled. target = true.

Just use the one you need.

Function Documentation

getScores_() [1/7]

static void getScores_ ( ScoreToTgtDecLabelPairs &  scores_labels, const HitType &  hit  )

inlinestatic

References IDScoreGetterSetter::checkTDAnnotation_(), and IDScoreGetterSetter::getTDLabel_().

getScores_() [2/7]

static void getScores_ ( ScoreToTgtDecLabelPairs &  scores_labels, const PeptideHit &  hit, HitPredicate &&  fun  )

inlinestatic

References IDScoreGetterSetter::getScores_().

getScores_() [3/7]

static void getScores_ ( ScoreToTgtDecLabelPairs &  scores_labels, const PeptideIdentification &  id, bool  all_hits, Args &&...  args  )

inlinestatic

References IDScoreGetterSetter::getScores_().

getScores_() [4/7]

static void getScores_ ( ScoreToTgtDecLabelPairs &  scores_labels, const PeptideIdentification &  id, IDPredicate &&  fun, bool  all_hits, Args &&...  args  )

inlinestatic

References IDScoreGetterSetter::getScores_().

getScores_() [5/7]

static void getScores_ ( ScoreToTgtDecLabelPairs &  scores_labels, const ProteinIdentification &  id  )

inlinestatic

References IDScoreGetterSetter::checkTDAnnotation_(), ProteinHit::getScore(), and IDScoreGetterSetter::getTDLabel_().

getScores_() [6/7]

static void getScores_ ( ScoreToTgtDecLabelPairs &  scores_labels, const std::vector< PeptideIdentification > &  ids, Args &&...  args  )

inlinestatic

References IDScoreGetterSetter::getScores_().

getScores_() [7/7]

static void getScores_ ( ScoreToTgtDecLabelPairs &  scores_labels, const std::vector< ProteinIdentification::ProteinGroup > &  grps, const std::unordered_set< std::string > &  decoy_accs  )

static

Referenced by IDScoreGetterSetter::getPeptideScoresFromMap_(), and IDScoreGetterSetter::getScores_().