ExperimentalDesign::MSFileSectionEntry Class Reference

#include <OpenMS/METADATA/ExperimentalDesign.h>

Public Member Functions
	MSFileSectionEntry ()=default

Public Attributes
unsigned	fraction_group = 1
	fraction group id More...
unsigned	fraction = 1
	fraction 1..m, mandatory, 1 if not set More...
std::string	path = "UNKNOWN_FILE"
	file name, mandatory More...
unsigned	label = 1
	the label (e.g.,: 1 for label-free, 1..8 for TMT8plex) More...
unsigned	sample = 1
	allows grouping by sample More...

Detailed Description

MSFileSectionEntry links single quant. values back the MS file It supports:

• multiplexed/labeled data via specification of the quantified label
• multiple fractions via specification of the:
  • fraction index (e.g., 1..10 if ten fractions were measured)
  • fraction_group to trace which fractions belong together

Constructor & Destructor Documentation

MSFileSectionEntry()

MSFileSectionEntry ( )

default

Member Data Documentation

fraction

unsigned fraction = 1

fraction 1..m, mandatory, 1 if not set

Referenced by UTILProteomicsLFQ::main_().

fraction_group

unsigned fraction_group = 1

fraction group id

Referenced by UTILProteomicsLFQ::main_().

label

unsigned label = 1

the label (e.g.,: 1 for label-free, 1..8 for TMT8plex)

Referenced by UTILProteomicsLFQ::main_().

path

std::string path = "UNKNOWN_FILE"

file name, mandatory

Referenced by UTILProteomicsLFQ::main_().

sample

unsigned sample = 1

allows grouping by sample

Referenced by UTILProteomicsLFQ::main_().