OpenPepXL.cpp File Reference

#include <OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h>
#include <OpenMS/ANALYSIS/XLMS/OPXLHelper.h>
#include <OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h>
#include <OpenMS/ANALYSIS/XLMS/XQuestScores.h>
#include <OpenMS/FORMAT/XQuestResultXMLFile.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/KERNEL/SpectrumHelper.h>
#include <OpenMS/FORMAT/FASTAFile.h>
#include <OpenMS/FORMAT/MzMLFile.h>
#include <OpenMS/FORMAT/ConsensusXMLFile.h>
#include <OpenMS/DATASTRUCTURES/ListUtilsIO.h>
#include <OpenMS/APPLICATIONS/TOPPBase.h>
#include <OpenMS/FORMAT/IdXMLFile.h>
#include <OpenMS/FORMAT/MzIdentMLFile.h>
#include <OpenMS/CHEMISTRY/ProteaseDigestion.h>
#include <OpenMS/CHEMISTRY/ProteaseDB.h>
#include <OpenMS/CHEMISTRY/ModificationsDB.h>
#include <OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h>
#include <OpenMS/ANALYSIS/ID/IDMapper.h>
#include <OpenMS/ANALYSIS/ID/PeptideIndexing.h>
#include <OpenMS/FILTERING/TRANSFORMERS/NLargest.h>
#include <OpenMS/MATH/STATISTICS/StatisticFunctions.h>
#include <OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h>
#include <iostream>
#include <cmath>
#include <numeric>

Classes
class	TOPPOpenPepXL

Macros
#define	NUMBER_OF_THREADS   (1)

Functions
int	main (int argc, const char **argv)

Macro Definition Documentation

NUMBER_OF_THREADS

#define NUMBER_OF_THREADS   (1)

Function Documentation

main()

int main	(	int	argc,
		const char **	argv
	)

References TOPPBase::main().