- n -

• n : EGHFitter1D::Data , EmgFitter1D::Data , RANSACParam
• n_buffer_ : Bzip2Ifstream , GzipIfstream
• n_decoys_ : ConfidenceScoring
• n_hits_ : XQuestResultXMLHandler , XQuestResultXMLFile
• n_parts_ : SimpleSVM
• n_samples : PeptideAndProteinQuant::Statistics
• n_spectra_ : SpectrumLookup
• n_term_gain_ : Enzyme
• n_term_mod_ : AASequence
• N_TERMINAL_AA : PeptideEvidence
• N_TERMINAL_POSITION : PeptideEvidence
• n_transitions_ : ConfidenceScoring
• name : ControlledVocabulary::CVTerm , CsiFingerIdMzTabWriter::CsiAdapterHit , CVTerm::Unit , MzIdentMLDOMHandler::AnalysisSoftware , MzIdentMLDOMHandler::DatabaseInput , ParamXMLHandler , SemanticValidator::CVTerm , ToolDescriptionInternal , IsobaricQuantitationMethod::IsobaricChannelInformation , ItraqConstants::ChannelInfo , LayerData , MzTabContactMetaData , MzTabInstrumentMetaData , Param::ParamEntry , Param::ParamIterator::TraceInfo , Param::ParamNode , ParameterInformation , QcMLFile::Attachment , QcMLFile::QualityParameter , RawMSSignalSimulation::ContaminantInfo , RNPxlSearch::FragmentAdductDefinition_
• name_ : AdductInfo , ControlledVocabulary , CVReference , CVTerm , Element , Enzyme , BaseException , HMMState , IdentificationHit , IMSElement , IncludeExcludeTarget , Instrument , InstrumentVisualizer , PTMXMLHandler , ItraqEightPlexQuantitationMethod , ItraqFourPlexQuantitationMethod , MetaInfoDescription , ModelDescription< D > , MSChromatogram , MSSpectrum , MzTabParameter , QcMLFile , ReactionMonitoringTransition , Residue , ResidueModification , Sample , Software , TMTElevenPlexQuantitationMethod , TMTSixPlexQuantitationMethod , TMTTenPlexQuantitationMethod , TOPPASToolVertex
• name_att_ : SemanticValidator
• name_of_file_ : SourceFile , SourceFileVisualizer
• name_of_MZMLtypes_ : FileTypes
• name_of_types_ : FileTypes
• name_to_counter_map_ : StreamHandler
• name_to_index_ : MetaInfoRegistry
• name_to_residue_ : CompNovoIdentificationBase
• name_to_state_ : HiddenMarkovModel
• name_to_stream_map_ : StreamHandler
• name_to_type_map_ : StreamHandler
• names_ : ElementDB , QcMLFile
• names_of_modeltype : MZTrafoModel
• names_of_quantmethod : MassTrace
• NamesOfAcquisitionMode : IonDetector
• NamesOfActivationMethod : Precursor
• NamesOfActivationMethodShort : Precursor
• NamesOfAnalyzerType : MassAnalyzer
• NamesOfAnnotationState : BaseFeature
• NamesOfChecksumType : SourceFile
• NamesOfInletType : IonSource
• NamesOfIonizationMethod : IonSource
• NamesOfIonOpticsType : Instrument
• NamesOfIsotopeVariant : Tagging
• NamesOfLabelType : LayerData
• NamesOfNumpressCompression : MSNumpressCoder
• NamesOfPeakMassType : ProteinIdentification
• NamesOfPolarity : IonSource
• NamesOfProcessingAction : DataProcessing
• NamesOfQuantTypes : MSQuantifications
• NamesOfReflectronState : MassAnalyzer
• NamesOfResolutionMethod : MassAnalyzer
• NamesOfResolutionType : MassAnalyzer
• NamesOfSampleState : Sample
• NamesOfScanDirection : MassAnalyzer
• NamesOfScanLaw : MassAnalyzer
• NamesOfScanMode : InstrumentSettings
• NamesOfSpecificity : EnzymaticDigestion
• NamesOfSpecificityType : Modification
• NamesOfSpectrumType : SpectrumSettings
• NamesOfType : IonDetector
• namesToIds_ : ControlledVocabulary
• nan_ : SVOutStream
• native_id : SpectrumMetaDataLookup::SpectrumMetaData
• native_id_ : ChromatogramSettings , SpectrumSettings , SpectrumSettingsVisualizer
• native_id_type_ : SourceFile , SourceFileVisualizer
• native_spectrum_name_ : PepXMLFile
• near_ : Spectrum3DOpenGLCanvas
• nearest_neighbour_index_ : MinimumDistance
• neg_ : ROCCurve
• neg_adducts_ : AccurateMassSearchEngine
• neg_adducts_fname_ : AccurateMassSearchEngine
• neg_charges_ : Compomer
• negative_mode_ : MetaboliteFeatureDeconvolution
• negative_prior_ : PosteriorErrorProbabilityModel
• neighbors_ : QTCluster
• nesting_level_ : MzXMLHandler
• net_charge_ : Compomer
• network_manager_ : TOPPASBase
• network_reply_ : TOPPASBase
• neutral_loss_average_mass_ : ResidueModification
• neutral_loss_diff_formula_ : UnimodXMLHandler , ResidueModification
• neutral_loss_diff_formulas_ : UnimodXMLHandler
• neutral_loss_mono_mass_ : ResidueModification
• neutral_losses_for_ions_ : SequestInfile
• NEUTRAL_MR : MS2Info
• new_eluent_ : GradientVisualizer
• new_node : _Alloc_base< _Tp, _Alloc >::NoLeakAlloc
• new_timepoint_ : GradientVisualizer
• newdescription_ : MetaInfoVisualizer
• newkey_ : MetaInfoVisualizer
• newline_ : SVOutStream
• newRowButton_ : ListEditor
• newvalue_ : MetaInfoVisualizer
• next_consumer_ : MSDataAggregatingConsumer
• next_index_ : MetaInfoRegistry
• nextrow_ : GradientVisualizer , MetaInfoVisualizer
• no_exceptions : Summary
• no_id : RNPxlReportRow
• no_precursors : IDMapper::SpectraIdentificationState
• no_rt_error_ : MascotXMLHandler
• node_offset_ : TOPPASBase
• nodes : Param::ParamNode
• nodes_ : SimpleSVM
• noise_for_empty_window_ : SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
• noise_level_ : PeakPickerCWT
• noise_threshold_int_ : MassTraceDetection
• noloss_regex_ : SpectrumAnnotator
• nominal_mass_ : IMSIsotopeDistribution
• non_zero_decomposition_coefficients : SIPPeptide
• norm_factor : FeatureDistance::DistanceParams_
• norm_rt_score : OpenSwath_Scores
• normalization_enabled_ : IsobaricQuantifier
• normalize_xcorr_ : SequestInfile
• normalized_experimental_rt : OpenSwath_Scores
• np_compression : MzMLHandlerHelper::BinaryData , MSNumpressCoder::NumpressConfig
• np_config_int_ : PeakFileOptions
• np_config_mz_ : PeakFileOptions
• nr_charges_ : DiaPrescore
• nr_isotopes_ : DiaPrescore
• nr_iterations_ : PeakPickerIterative
• nr_ms1_spectra_ : CachedSwathFileConsumer , MzMLSwathFileConsumer
• nr_ms2_spectra_ : CachedSwathFileConsumer , MzMLSwathFileConsumer
• nr_partitions_ : QTClusterFinder
• nr_peaks : OpenSwath_Scores
• nr_windows : SignalToNoiseEstimatorMedianRapid::NoiseEstimator
• NRISOTOPES : MSPeak
• nrIsotopes_ : DeconvPeak
• nt_regex_ : SpectrumAnnotator
• NTerm_loss_formulas_ : Residue
• NTerm_loss_names_ : Residue
• nucleotide_reading_frame_ : SequestInfile
• null_ : MzTabNullAbleBase
• num_frags_ : SequestOutfile
• num_maps_ : KDTreeFeatureMaps , QTCluster , QTClusterFinder
• NUM_PARAMS_ : EGHTraceFitter , GaussTraceFitter
• num_peptides_distinct_ms_run : MzTabProteinSectionRow
• num_peptides_unique_ms_run : MzTabProteinSectionRow
• num_psms_ms_run : MzTabProteinSectionRow
• number : FuzzyStringComparator::StreamElement_
• number_ : Sample
• number_intensity_levels : SvmTheoreticalSpectrumGenerator::SvmModelParameterSet
• number_ms2_empty : IsobaricQuantifierStatistics
• number_ms2_total : IsobaricQuantifierStatistics
• number_of_decoy : ProteinResolver::MSDGroup
• number_of_experimental_peptides : ProteinResolver::ProteinEntry
• number_of_max_aa_ : MassDecomposition
• number_of_missed_cleavages_ : XTandemInfile
• number_of_modifications_ : ModifierRep
• number_of_runs_ : ConsensusIDAlgorithm
• number_of_target : ProteinResolver::MSDGroup
• number_of_target_plus_decoy : ProteinResolver::MSDGroup
• number_of_threads_ : XTandemInfile
• number_regions : SvmTheoreticalSpectrumGenerator::SvmModelParameterSet
• numden_r_ids_ : MzQuantMLHandler
• numerator_ref_ : ConsensusFeature::Ratio
• numpress_coder_ : MzMLSqliteHandler
• numpressErrorTolerance : MSNumpressCoder::NumpressConfig
• numpressFixedPoint : MSNumpressCoder::NumpressConfig