- a -

• AASequence::ConstIterator : AASequence::Iterator

- c -

• ConsensusMapNormalizerAlgorithmThreshold : ConsensusMapNormalizerAlgorithmMedian
• ConsensusXMLFile : IdXMLFile
• ConstRefVector : ConstRefVector< ContainerT >::ConstRefVectorConstIterator< ValueT > , ConstRefVector< ContainerT >::ConstRefVectorIterator< ValueT >
• CrossLinksDB : ModificationsDB

- f -

• FeatureFinderAlgorithmSHCtrl : SuperHirnParameters
• FeatureXMLFile : IdXMLFile

- h -

• HashGrid : HashGrid< Cluster >::ConstIterator , HashGrid< Cluster >::Iterator

- i -

• Internal::ClassTest::isFileSimilar : FuzzyStringComparator
• Internal::ClassTest::testStringSimilar : FuzzyStringComparator
• IsotopeWaveletTransform : IsotopeWaveletTransform< PeakType >::TransSpectrum

- k -

• KDTree : _Base_iterator

- l -

• LogStream : LogStreamBuf

- o -

• operator!= : _Iterator< _Val, _Ref, _Ptr > , DataValue
• operator+ : ConstRefVector< ContainerT >::ConstRefVectorConstIterator< ValueT > , ConstRefVector< ContainerT >::ConstRefVectorIterator< ValueT >
• operator- : ConstRefVector< ContainerT >::ConstRefVectorConstIterator< ValueT >
• operator< : Compomer , DataValue
• operator<< : AASequence , AccurateMassSearchResult , Adduct , Compomer , ConnectedComponent , ControlledVocabulary , DataValue , Element , EmpiricalFormula , Enzyme , LogConfigHandler , BasicStatistics< RealT > , Peak2D , RawData , Residue , StreamHandler
• operator== : _Iterator< _Val, _Ref, _Ptr > , Adduct , Compomer , DataValue
• operator> : DataValue
• operator>> : AASequence

- p -

• PeptideIdentificationVisualizer : MetaDataBrowser
• ProteinIdentificationVisualizer : MetaDataBrowser
• PScore : AScore

- r -

• ResidueDB : Residue

- s -

• singletonsNeedNoFriends : Factory< FactoryProduct > , SingletonRegistry
• SparseVector< Value > : SparseVector< Value >::SparseVectorConstIterator , SparseVector< Value >::SparseVectorConstReverseIterator , SparseVector< Value >::SparseVectorIterator , SparseVector< Value >::SparseVectorReverseIterator
• SparseVectorConstIterator : SparseVector< Value >::SparseVectorIterator
• SparseVectorConstReverseIterator : SparseVector< Value >::SparseVectorReverseIterator
• SparseVectorIterator : SparseVector< Value >::SparseVectorConstIterator
• Spectrum3DCanvas : Spectrum3DOpenGLCanvas
• Spectrum3DOpenGLCanvas : Spectrum3DCanvas
• SvmTheoreticalSpectrumGeneratorTrainer : SvmTheoreticalSpectrumGenerator
• swap : ConstRefVector< ContainerT >::ConstRefVectorIterator< ValueT > , ConstRefVector< ContainerT >

- t -

• TestTOPPView : TOPPViewBase
• TOPPBase : File