This is the complete list of members for Enzyme, including all inherited members.
| addSynonym(const String &synonym) | Enzyme | |
| c_term_gain_ | Enzyme | protected |
| cleavage_regex_ | Enzyme | protected |
| comet_id_ | Enzyme | protected |
| Enzyme(const Enzyme &enzyme) | Enzyme | |
| Enzyme(const String &name, const String &cleavage_regex, const std::set< String > &synonyms=std::set< String >(), String regex_description="", EmpiricalFormula n_term_gain=EmpiricalFormula("H"), EmpiricalFormula c_term_gain=EmpiricalFormula("OH"), String psi_id="", String xtandem_id="", UInt comet_id=0, Int msgf_id=-1, UInt omssa_id=0) | Enzyme | explicit |
| Enzyme() | Enzyme | protected |
| getCometID() const | Enzyme | |
| getCTermGain() const | Enzyme | |
| getMSGFID() const | Enzyme | |
| getName() const | Enzyme | |
| getNTermGain() const | Enzyme | |
| getOMSSAID() const | Enzyme | |
| getPSIID() const | Enzyme | |
| getRegEx() const | Enzyme | |
| getRegExDescription() const | Enzyme | |
| getSynonyms() const | Enzyme | |
| getXTandemID() const | Enzyme | |
| msgf_id_ | Enzyme | protected |
| n_term_gain_ | Enzyme | protected |
| name_ | Enzyme | protected |
| omssa_id_ | Enzyme | protected |
| operator!=(const Enzyme &enzyme) const | Enzyme | |
| operator!=(String cleavage_regex) const | Enzyme | |
| operator<(const Enzyme &enzyme) const | Enzyme | |
| operator<<(std::ostream &os, const Enzyme &enzyme) | Enzyme | friend |
| operator=(const Enzyme &enzyme) | Enzyme | |
| operator==(const Enzyme &enzyme) const | Enzyme | |
| operator==(String cleavage_regex) const | Enzyme | |
| psi_id_ | Enzyme | protected |
| regex_description_ | Enzyme | protected |
| setCometID(UInt value) | Enzyme | |
| setCTermGain(EmpiricalFormula value) | Enzyme | |
| setMSGFID(Int value) | Enzyme | |
| setName(const String &name) | Enzyme | |
| setNTermGain(EmpiricalFormula value) | Enzyme | |
| setOMSSAID(UInt value) | Enzyme | |
| setPSIID(String value) | Enzyme | |
| setRegEx(const String &cleavage_regex) | Enzyme | |
| setRegExDescription(String value) | Enzyme | |
| setSynonyms(const std::set< String > &synonyms) | Enzyme | |
| setXTandemID(String value) | Enzyme | |
| synonyms_ | Enzyme | protected |
| xtandem_id_ | Enzyme | protected |
| ~Enzyme() | Enzyme | virtual |