NuXLProteinReport Struct Reference

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#include <OpenMS/ANALYSIS/NUXL/NuXLReport.h>

Static Public Member Functions
static void	annotateProteinModificationForTopHits (std::vector< ProteinIdentification > &prot_ids, const PeptideIdentificationList &peps, TextFile &tsv_file)
static std::map< char, double >	getCrossLinkEfficiency (const PeptideIdentificationList &peps)
static std::map< String, size_t >	countAdducts (const PeptideIdentificationList &peps)
static void	mapAccessionToTDProteins (ProteinIdentification &prot_id, std::map< String, ProteinHit * > &acc2protein_targets, std::map< String, ProteinHit * > &acc2protein_decoys)

Detailed Description

protein report

Member Function Documentation

annotateProteinModificationForTopHits()

static void annotateProteinModificationForTopHits ( std::vector< ProteinIdentification > &  prot_ids, const PeptideIdentificationList &  peps, TextFile &  tsv_file  )

static

countAdducts()

static std::map<String, size_t> countAdducts ( const PeptideIdentificationList &  peps )

static

getCrossLinkEfficiency()

static std::map<char, double> getCrossLinkEfficiency ( const PeptideIdentificationList &  peps )

static

mapAccessionToTDProteins()

static void mapAccessionToTDProteins ( ProteinIdentification &  prot_id, std::map< String, ProteinHit * > &  acc2protein_targets, std::map< String, ProteinHit * > &  acc2protein_decoys  )

static