OpenSearchModificationAnalysis.h File Reference

#include <OpenMS/METADATA/PeptideIdentificationList.h>
#include <OpenMS/DATASTRUCTURES/String.h>
#include <map>
#include <vector>
#include <unordered_map>
#include <unordered_set>

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Classes
class	OpenSearchModificationAnalysis
	Utility class for analyzing modification patterns in open search results. More...
struct	OpenSearchModificationAnalysis::ModificationPattern
	Stores details of a modification pattern found in the data. More...
struct	OpenSearchModificationAnalysis::ModificationSummary
	Data structure for modification summary output. More...
struct	OpenSearchModificationAnalysis::FuzzyDoubleComparator
	Comparator for approximate comparison of double values. More...

Namespaces
	OpenMS
	Main OpenMS namespace.

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Class Documentation

OpenMS::OpenSearchModificationAnalysis::ModificationPattern

struct OpenMS::OpenSearchModificationAnalysis::ModificationPattern

Stores details of a modification pattern found in the data.

Collaboration diagram for OpenSearchModificationAnalysis::ModificationPattern:

Class Members
double	count	Number of peptides with this modification.
vector< double >	masses	Masses associated with the modification.
int	num_charge_states	Number of different charge states observed.

OpenMS::OpenSearchModificationAnalysis::ModificationSummary

struct OpenMS::OpenSearchModificationAnalysis::ModificationSummary

Data structure for modification summary output.

Collaboration diagram for OpenSearchModificationAnalysis::ModificationSummary:

Class Members
int	count	Modification rate (number of occurrences)
vector< double >	masses	Masses associated with the modification.
String	name	Modification name.
int	num_charge_states	Number of charge states.