| action_mode_ | PlotCanvas | protected |
| actionModeChange() | PlotCanvas | signal |
| ActionModes enum name | PlotCanvas | |
| activateLayer(Size layer_index) override | Plot1DCanvas | slot |
| activateSpectrum(Size index, bool repaint=true) | Plot1DCanvas | |
| addChromLayer(ExperimentSharedPtrType chrom_exp_sptr, ODExperimentSharedPtrType ondisc_sptr, OSWDataSharedPtrType chrom_annotation, const int index, const String &filename, const String &caption, const bool multiple_select) | Plot1DCanvas | |
| addDataProcessing_(PeakMap &map, DataProcessing::ProcessingAction action) const | PlotCanvas | inlineprotected |
| addLabelAnnotation_(const QPoint &screen_position, const QString &label_text) | Plot1DCanvas | protected |
| addLayer(ExperimentSharedPtrType map, ODExperimentSharedPtrType od_map, const String &filename="") | PlotCanvas | |
| addLayer(FeatureMapSharedPtrType map, const String &filename="") | PlotCanvas | |
| addLayer(ConsensusMapSharedPtrType map, const String &filename="") | PlotCanvas | |
| addLayer(std::vector< PeptideIdentification > &peptides, const String &filename="") | PlotCanvas | |
| addPeakAnnotation(const PeakIndex &peak_index, const QString &text, const QColor &color) | Plot1DCanvas | |
| addUserLabelAnnotation_(const QPoint &screen_position) | Plot1DCanvas | protected |
| addUserPeakAnnotation_(PeakIndex near_peak) | Plot1DCanvas | protected |
| aligned_peaks_indices_ | Plot1DCanvas | protected |
| aligned_peaks_mz_delta_ | Plot1DCanvas | protected |
| alignment_layer_1_ | Plot1DCanvas | protected |
| alignment_layer_2_ | Plot1DCanvas | protected |
| alignment_score_ | Plot1DCanvas | protected |
| AM_MEASURE enum value | PlotCanvas | |
| AM_TRANSLATE enum value | PlotCanvas | |
| AM_ZOOM enum value | PlotCanvas | |
| AreaType typedef | PlotCanvas | |
| buffer_ | PlotCanvas | protected |
| changeLayerFilterState(Size i, bool b) | PlotCanvas | slot |
| changeLegendVisibility() | PlotCanvas | signal |
| changeVisibility(Size i, bool b) | PlotCanvas | slot |
| changeVisibleArea_(double lo, double hi, bool repaint=true, bool add_to_stack=false) | Plot1DCanvas | protected |
| changeVisibleArea_(const AreaType &new_area, bool repaint=true, bool add_to_stack=false) override | Plot1DCanvas | protectedvirtual |
| check_defaults_ | DefaultParamHandler | protected |
| ConsensusMapSharedPtrType typedef | PlotCanvas | |
| ConsensusMapType typedef | PlotCanvas | |
| ConstExperimentSharedPtrType typedef | PlotCanvas | |
| context_add_ | PlotCanvas | protected |
| contextMenuEvent(QContextMenuEvent *e) override | Plot1DCanvas | protected |
| currentLayerParamtersChanged_() | Plot1DCanvas | protectedslot |
| dataToWidget(const PeakType &peak, QPoint &point, bool flipped=false, bool percentage=true) | Plot1DCanvas | |
| dataToWidget(double x, double y, QPoint &point, bool flipped=false, bool percentage=false) | Plot1DCanvas | |
| dataToWidget_(double x, double y, QPoint &point) | PlotCanvas | inlineprotected |
| dataToWidgetDistance(double x, double y, QPoint &point) | PlotCanvas | inlineslot |
| DefaultParamHandler(const String &name) | DefaultParamHandler | |
| DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
| DefaultParamHandler() | DefaultParamHandler | private |
| defaults_ | DefaultParamHandler | protected |
| defaultsToParam_() | DefaultParamHandler | protected |
| DM_CONNECTEDLINES enum value | Plot1DCanvas | |
| DM_PEAKS enum value | Plot1DCanvas | |
| draw_interesting_MZs_ | Plot1DCanvas | protected |
| draw_modes_ | Plot1DCanvas | protected |
| drawAlignment_(QPainter &painter) | Plot1DCanvas | protected |
| drawCoordinates_(QPainter &painter, const PeakIndex &peak) | Plot1DCanvas | protected |
| drawDeltas_(QPainter &painter, const PeakIndex &start, const PeakIndex &end) | Plot1DCanvas | protected |
| drawHighlightedPeak_(Size layer_index, const PeakIndex &peak, QPainter &painter, bool draw_elongation=false) | Plot1DCanvas | protected |
| DrawModes enum name | Plot1DCanvas | |
| drawText_(QPainter &painter, QStringList text) | PlotCanvas | protected |
| ensureAnnotationsWithinDataRange_() | Plot1DCanvas | protected |
| enterEvent(QEvent *e) override | PlotCanvas | protected |
| error_name_ | DefaultParamHandler | protected |
| ExperimentSharedPtrType typedef | PlotCanvas | |
| ExperimentType typedef | PlotCanvas | |
| FeatureMapSharedPtrType typedef | PlotCanvas | |
| FeatureMapType typedef | PlotCanvas | |
| findPeakAtPosition_(QPoint) | Plot1DCanvas | protected |
| finishAdding_() override | Plot1DCanvas | protectedvirtual |
| flipLayer(Size index) | Plot1DCanvas | |
| flippedLayersExist() | Plot1DCanvas | |
| focusOutEvent(QFocusEvent *e) override | PlotCanvas | protected |
| getActionMode() const | PlotCanvas | inline |
| getAlignedPeaksIndices() | Plot1DCanvas | |
| getAlignmentScore() const | Plot1DCanvas | |
| getAlignmentSize() | Plot1DCanvas | |
| getCurrentLayer() const | PlotCanvas | inline |
| getCurrentLayer() | PlotCanvas | inline |
| getCurrentLayerIndex() const | PlotCanvas | inline |
| getCurrentMaxIntensity() const | PlotCanvas | inline |
| getCurrentMinIntensity() const | PlotCanvas | inline |
| getDataRange() | PlotCanvas | |
| getDefaults() const | DefaultParamHandler | |
| getDrawMode() const | Plot1DCanvas | |
| getIdentificationMZ_(const Size layer_index, const PeptideIdentification &peptide) const | PlotCanvas | protected |
| getIntensityMode() const | PlotCanvas | inline |
| getLayer(Size index) const | PlotCanvas | inline |
| getLayer(Size index) | PlotCanvas | inline |
| getLayerCount() const | PlotCanvas | inline |
| getLayerFlag(LayerDataBase::Flags f) const | PlotCanvas | inline |
| getLayerFlag(Size layer, LayerDataBase::Flags f) const | PlotCanvas | inline |
| getLayerName(Size i) | PlotCanvas | |
| getMaxIntensity(Size index) const | PlotCanvas | inline |
| getMinIntensity(Size index) const | PlotCanvas | inline |
| getName() const | DefaultParamHandler | |
| getParameters() const | DefaultParamHandler | |
| getPercentageFactor() const | PlotCanvas | |
| getPlotWidget() const | PlotCanvas | inline |
| getSnapFactor() | PlotCanvas | |
| getSubsections() const | DefaultParamHandler | |
| getVisibleArea() const | PlotCanvas | inline |
| getVisibleConsensusData(ConsensusMapType &map) const | PlotCanvas | slot |
| getVisibleFeatureData(FeatureMapType &map) const | PlotCanvas | slot |
| getVisibleIdentifications(std::vector< PeptideIdentification > &peptides) const | PlotCanvas | slot |
| getVisiblePeakData(ExperimentType &map) const | PlotCanvas | slot |
| gridLinesShown() const | PlotCanvas | inline |
| horizontalScrollBarChange(int value) override | Plot1DCanvas | slot |
| IM_LOG enum value | PlotCanvas | |
| IM_NONE enum value | PlotCanvas | |
| IM_PERCENTAGE enum value | PlotCanvas | |
| IM_SNAP enum value | PlotCanvas | |
| intensity_mode_ | PlotCanvas | protected |
| intensityModeChange_() override | Plot1DCanvas | protectedvirtual |
| IntensityModes enum name | PlotCanvas | |
| ion_ladder_visible_ | Plot1DCanvas | protected |
| is_swapped_ | Plot1DCanvas | protected |
| isDrawInterestingMZs() const | Plot1DCanvas | |
| isIonLadderVisible() const | Plot1DCanvas | |
| isMzToXAxis() const | PlotCanvas | inline |
| keyPressEvent(QKeyEvent *e) override | Plot1DCanvas | protected |
| keyReleaseEvent(QKeyEvent *e) override | PlotCanvas | protected |
| LabelMode enum name | Plot1DCanvas | |
| last_mouse_pos_ | PlotCanvas | protected |
| layerActivated(QWidget *w) | PlotCanvas | signal |
| layerModficationChange(Size layer, bool modified) | PlotCanvas | signal |
| layers_ | PlotCanvas | protected |
| layerZoomChanged(QWidget *w) | PlotCanvas | signal |
| leaveEvent(QEvent *e) override | PlotCanvas | protected |
| LM_XABSOLUTE_YABSOLUTE enum value | Plot1DCanvas | |
| LM_XABSOLUTE_YPERCENT enum value | Plot1DCanvas | |
| LM_XPERCENT_YABSOLUTE enum value | Plot1DCanvas | |
| LM_XPERCENT_YPERCENT enum value | Plot1DCanvas | |
| measurement_start_ | PlotCanvas | protected |
| measurement_start_point_ | Plot1DCanvas | protected |
| mirror_mode_ | Plot1DCanvas | protected |
| mirrorModeActive() const | Plot1DCanvas | |
| modificationStatus_(Size layer_index, bool modified) | PlotCanvas | protected |
| mouseMoveEvent(QMouseEvent *e) override | Plot1DCanvas | protected |
| mousePressEvent(QMouseEvent *e) override | Plot1DCanvas | protected |
| mouseReleaseEvent(QMouseEvent *e) override | Plot1DCanvas | protected |
| moving_annotations_ | Plot1DCanvas | protected |
| mz_to_x_axis_ | PlotCanvas | protected |
| mzToXAxis(bool mz_to_x_axis) | PlotCanvas | |
| ODExperimentSharedPtrType typedef | PlotCanvas | |
| operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
| operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
| OSWDataSharedPtrType typedef | PlotCanvas | |
| overall_data_range_ | PlotCanvas | protected |
| paint(QPainter *paint_device, QPaintEvent *e) | Plot1DCanvas | |
| Painter1DPeak class | Plot1DCanvas | friend |
| paintEvent(QPaintEvent *e) override | Plot1DCanvas | protected |
| paintGridLines_(QPainter &painter) override | Plot1DCanvas | protectedvirtual |
| param_ | DefaultParamHandler | protected |
| peak_penstyle_ | Plot1DCanvas | protected |
| PeakType typedef | PlotCanvas | |
| percentage_factor_ | PlotCanvas | protected |
| performAlignment(Size layer_index_1, Size layer_index_2, const Param ¶m) | Plot1DCanvas | |
| Plot1DCanvas(const Param &preferences, QWidget *parent=nullptr) | Plot1DCanvas | |
| PlotCanvas(const Param &preferences, QWidget *parent=nullptr) | PlotCanvas | |
| PointType typedef | PlotCanvas | |
| popIncompleteLayer_(const QString &error_message="") | PlotCanvas | protected |
| preferencesChange() | PlotCanvas | signal |
| RangeType typedef | PlotCanvas | |
| recalculateAxes() | PlotCanvas | signal |
| recalculateRanges_(UInt mz_dim, UInt rt_dim, UInt it_dim) | PlotCanvas | protected |
| recalculateSnapFactor_() override | Plot1DCanvas | protectedvirtual |
| removeLayer(Size layer_index) override | Plot1DCanvas | slot |
| removeLayers() | PlotCanvas | inline |
| resetAlignment() | Plot1DCanvas | |
| resetZoom(bool repaint=true) | PlotCanvas | slot |
| resizeEvent(QResizeEvent *e) override | PlotCanvas | protected |
| rubber_band_ | PlotCanvas | protected |
| saveCurrentLayer(bool visible) override | Plot1DCanvas | virtual |
| selected_peak_ | PlotCanvas | protected |
| sendCursorStatus(double mz=-1.0, double rt=-1.0) | PlotCanvas | signal |
| sendStatusMessage(std::string message, OpenMS::UInt time) | PlotCanvas | signal |
| setAdditionalContextMenu(QMenu *menu) | PlotCanvas | slot |
| setCurrentLayerParameters(const Param ¶m) | PlotCanvas | inline |
| setCurrentLayerPeakPenStyle(Qt::PenStyle ps) | Plot1DCanvas | |
| setDrawInterestingMZs(bool enable) | Plot1DCanvas | |
| setDrawMode(DrawModes mode) | Plot1DCanvas | |
| setFilters(const DataFilters &filters) | PlotCanvas | virtual |
| setIntensityMode(IntensityModes mod) | PlotCanvas | inline |
| setIonLadderVisible(bool show) | Plot1DCanvas | |
| setLabel(LayerDataBase::LabelType label) | PlotCanvas | inline |
| setLayerFlag(LayerDataBase::Flags f, bool value) | PlotCanvas | inline |
| setLayerFlag(Size layer, LayerDataBase::Flags f, bool value) | PlotCanvas | inline |
| setLayerName(Size i, const String &name) | PlotCanvas | |
| setMirrorModeActive(bool b) | Plot1DCanvas | |
| setName(const String &name) | DefaultParamHandler | |
| setParameters(const Param ¶m) | DefaultParamHandler | |
| setPlotWidget(PlotWidget *widget) | PlotCanvas | inline |
| setSwappedAxis(bool swapped) | Plot1DCanvas | |
| setTextBox(const QString &html) | Plot1DCanvas | |
| setVisibleArea(DRange< 2 > range) | Plot1DCanvas | slot |
| OpenMS::PlotCanvas::setVisibleArea(const AreaType &area) | PlotCanvas | slot |
| show_alignment_ | Plot1DCanvas | protected |
| show_grid_ | PlotCanvas | protected |
| show_timing_ | PlotCanvas | protected |
| showCurrentLayerPreferences() override | Plot1DCanvas | virtual |
| showCurrentPeaksAs2D() | Plot1DCanvas | signal |
| showCurrentPeaksAs3D() | Plot1DCanvas | signal |
| showCurrentPeaksAsDIA() | Plot1DCanvas | signal |
| showCurrentPeaksAsIonMobility() | Plot1DCanvas | signal |
| showGridLines(bool show) | PlotCanvas | slot |
| showMetaData(bool modifiable=false, Int index=-1) | PlotCanvas | virtual |
| snap_factors_ | PlotCanvas | protected |
| spectrum_widget_ | PlotCanvas | protected |
| SpectrumConstIteratorType typedef | PlotCanvas | |
| SpectrumType typedef | PlotCanvas | |
| subsections_ | DefaultParamHandler | protected |
| text_box_content_ | Plot1DCanvas | protected |
| TOP_MARGIN | Plot1DCanvas | static |
| translateBackward_() | PlotCanvas | protectedvirtual |
| translateForward_() | PlotCanvas | protectedvirtual |
| translateLeft_(Qt::KeyboardModifiers m) override | Plot1DCanvas | protectedvirtual |
| translateRight_(Qt::KeyboardModifiers m) override | Plot1DCanvas | protectedvirtual |
| update_(const char *caller_name) | PlotCanvas | protectedvirtual |
| update_buffer_ | PlotCanvas | protected |
| updateCursor_() | PlotCanvas | protectedslot |
| updateHScrollbar(float, float, float, float) | PlotCanvas | signal |
| updateLayer(Size i) override | Plot1DCanvas | slot |
| updateMembers_() | DefaultParamHandler | protectedvirtual |
| updatePercentageFactor_(Size layer_index) | Plot1DCanvas | protected |
| updateScrollbars_() override | Plot1DCanvas | protectedvirtual |
| updateVScrollbar(float, float, float, float) | PlotCanvas | signal |
| verticalScrollBarChange(int value) | PlotCanvas | virtualslot |
| visible_area_ | PlotCanvas | protected |
| visibleAreaChanged(DRange< 2 > area) | PlotCanvas | signal |
| warn_empty_defaults_ | DefaultParamHandler | protected |
| wheelEvent(QWheelEvent *e) override | PlotCanvas | protected |
| widgetToData(const QPoint &pos, bool percentage=false) | Plot1DCanvas | |
| widgetToData(double x, double y, bool percentage=false) | Plot1DCanvas | |
| widgetToData_(double x, double y) | PlotCanvas | inlineprotected |
| widgetToData_(const QPoint &pos) | PlotCanvas | inlineprotected |
| widgetToDataDistance(double x, double y) | PlotCanvas | inlineslot |
| writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="") | DefaultParamHandler | static |
| zoom_(int x, int y, bool zoom_in) override | Plot1DCanvas | protectedvirtual |
| zoom_pos_ | PlotCanvas | protected |
| zoom_stack_ | PlotCanvas | protected |
| zoomAdd_(const AreaType &area) | PlotCanvas | protected |
| zoomBack_() | PlotCanvas | protected |
| zoomClear_() | PlotCanvas | protected |
| zoomForward_() override | Plot1DCanvas | protectedvirtual |
| ~DefaultParamHandler() | DefaultParamHandler | virtual |
| ~Plot1DCanvas() override | Plot1DCanvas | |
| ~PlotCanvas() override | PlotCanvas | |