SimTypes.h File Reference

#include <vector>
#include <utility>
#include <map>
#include <boost/shared_ptr.hpp>
#include <boost/random/mersenne_twister.hpp>
#include <OpenMS/CHEMISTRY/AASequence.h>
#include <OpenMS/FORMAT/FASTAFile.h>
#include <OpenMS/KERNEL/FeatureMap.h>
#include <OpenMS/KERNEL/MSExperiment.h>
#include <OpenMS/KERNEL/Peak2D.h>
#include <OpenMS/KERNEL/StandardTypes.h>
#include <OpenMS/METADATA/MetaInfoInterface.h>

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Classes
struct	SimProtein
	Plain data object holding sequence and abundance information on a single protein. More...
class	SimRandomNumberGenerator
	Wrapper class for random number generators used by the simulation classes. More...

Namespaces
	OpenMS
	Main OpenMS namespace.
	OpenMS::SimTypes

Typedefs
typedef Peak2D::CoordinateType	SimCoordinateType
	Coordinate type in mz and rt dimension. More...
typedef Peak2D::IntensityType	SimIntensityType
	Abundance of proteins/peptides. More...
typedef Feature::ChargeType	SimChargeType
	Charge of a peptide. More...
typedef Peak1D	SimPointType
	Raw data point. More...
typedef std::vector< SimProtein >	SampleProteins
	Container for FASTAEntry & abundance information. More...
typedef std::vector< SampleProteins >	SampleChannels
	Container for multiple channels of SampleProteins. More...
typedef FeatureMap	FeatureMapSim
	Sim FeatureMap. More...
typedef std::vector< FeatureMapSim >	FeatureMapSimVector
	Sim FeatureMap Vector. More...
typedef PeakMap	MSSimExperiment
	Sim MSExperiment type. More...
typedef boost::shared_ptr< SimRandomNumberGenerator >	MutableSimRandomNumberGeneratorPtr