11 #include <OpenMS/VISUAL/OpenMS_GUIConfig.h> 
   27   class ConsensusFeature;
 
   29   class LayerDataConsensus;
 
   30   class LayerDataFeature;
 
   32   class LayerDataIonMobility;
 
A consensus feature spanning multiple LC-MS/MS experiments.
Definition: ConsensusFeature.h:45
 
Definition: ConvexHull2D.h:47
 
std::vector< PeptideIdentification > PepIds
Definition: IPeptideIds.h:25
 
Class that stores the data for one layer of type Chromatogram.
Definition: LayerDataChrom.h:24
 
Class that stores the data for one layer of type ConsensusMap.
Definition: LayerDataConsensus.h:24
 
Class that stores the data for one layer of type FeatureMap.
Definition: LayerDataFeature.h:23
 
Class that stores the data for one layer of type PeptideIdentifications.
Definition: LayerDataIdent.h:23
 
Class that stores the data for one layer of type IonMobility.
Definition: LayerDataIonMobility.h:28
 
Class that stores the data for one layer of type PeakMap.
Definition: LayerDataPeak.h:29
 
A base class for painting all items from a data layer (as supported by class derived from here) onto ...
Definition: Painter2DBase.h:42
 
virtual void paint(QPainter *painter, Plot2DCanvas *canvas, int layer_index)=0
Paints items using the given painter onto the canvas.
 
virtual ~Painter2DBase()=default
 
static void paintConvexHull_(QPainter &painter, Plot2DCanvas *canvas, const ConvexHull2D &hull, bool has_identifications)
Paints a convex hull.
 
virtual void highlightElement(QPainter *painter, Plot2DCanvas *canvas, const PeakIndex element)
Emphasize a certain element (e.g. feature), e.g. when mouse hovering. By default, nothing is highligh...
 
static void paintPeptideIDs_(QPainter *painter, Plot2DCanvas *canvas, const IPeptideIds::PepIds &ids, int layer_index)
 
static void paintConvexHulls_(QPainter &painter, Plot2DCanvas *canvas, const std::vector< ConvexHull2D > &hulls, bool has_identifications)
Paints convex hulls.
 
Painter2D for chromatograms.
Definition: Painter2DBase.h:131
 
void paint(QPainter *painter, Plot2DCanvas *canvas, int layer_index) override
Paints items using the given painter onto the canvas.
 
const LayerDataChrom * layer_
the data to paint
Definition: Painter2DBase.h:139
 
Painter2DChrom(const LayerDataChrom *parent)
C'tor which remembers the layer to paint.
 
Painter2D for ConsensusFeatures.
Definition: Painter2DBase.h:191
 
void paintConsensusElement_(QPainter *painter, Plot2DCanvas *canvas, Size layer_index, const ConsensusFeature &cf)
Paints one consensus element of a consensus features layer.
 
const LayerDataConsensus * layer_
the data to paint
Definition: Painter2DBase.h:229
 
Painter2DConsensus(const LayerDataConsensus *parent)
C'tor which remembers the layer to paint.
 
void paintConsensusElements_(QPainter *painter, Plot2DCanvas *canvas, Size layer_index)
Paints the consensus elements of a consensus features layer.
 
void paint(QPainter *, Plot2DCanvas *canvas, int layer_index) override
Paints items using the given painter onto the canvas.
 
bool isConsensusFeatureVisible_(const Plot2DCanvas *canvas, const ConsensusFeature &cf, Size layer_index)
checks if any element of a consensus feature is currently visible.
 
void highlightElement(QPainter *painter, Plot2DCanvas *canvas, const PeakIndex element) override
Emphasize a certain element (e.g. feature), e.g. when mouse hovering. By default, nothing is highligh...
 
Painter2D for Features.
Definition: Painter2DBase.h:163
 
void paintTraceConvexHulls_(QPainter *painter, Plot2DCanvas *canvas)
Paints convex hulls (one for each mass trace) of a features layer.
 
Painter2DFeature(const LayerDataFeature *parent)
C'tor which remembers the layer to paint.
 
const LayerDataFeature * layer_
the data to paint
Definition: Painter2DBase.h:183
 
void paint(QPainter *, Plot2DCanvas *canvas, int layer_index) override
Paints items using the given painter onto the canvas.
 
void highlightElement(QPainter *painter, Plot2DCanvas *canvas, const PeakIndex element) override
Emphasize a certain element (e.g. feature), e.g. when mouse hovering. By default, nothing is highligh...
 
void paintFeatureConvexHulls_(QPainter *painter, Plot2DCanvas *canvas)
Paints the convex hulls (one for each feature) of a features layer.
 
Painter2D for Identifications.
Definition: Painter2DBase.h:236
 
const LayerDataIdent * layer_
the data to paint
Definition: Painter2DBase.h:245
 
Painter2DIdent(const LayerDataIdent *parent)
C'tor which remembers the layer to paint.
 
void paint(QPainter *, Plot2DCanvas *canvas, int layer_index) override
Implementation of base class.
 
Painter2D for ion mobilograms.
Definition: Painter2DBase.h:147
 
void paint(QPainter *painter, Plot2DCanvas *canvas, int layer_index) override
Paints items using the given painter onto the canvas.
 
const LayerDataIonMobility * layer_
the data to paint
Definition: Painter2DBase.h:155
 
Painter2DIonMobility(const LayerDataIonMobility *parent)
C'tor which remembers the layer to paint.
 
Painter2D for spectra.
Definition: Painter2DBase.h:94
 
void paintMaximumIntensities_(QPainter &painter, Plot2DCanvas *canvas, Size layer_index, Size rt_pixel_count, Size mz_pixel_count)
Paints maximum intensity of individual peaks.
 
void paintPrecursorPeaks_(QPainter &painter, Plot2DCanvas *canvas)
Paints the locations where MS2 scans where triggered.
 
void paintAllIntensities_(QPainter &painter, Plot2DCanvas *canvas, Size layer_index, double pen_width)
 
Painter2DPeak(const LayerDataPeak *parent)
C'tor which remembers the layer to paint.
 
const LayerDataPeak * layer_
the data to paint
Definition: Painter2DBase.h:123
 
void paint(QPainter *, Plot2DCanvas *canvas, int layer_index) override
Paints items using the given painter onto the canvas.
 
An empty base class with some static convenience functions.
Definition: PainterBase.h:39
 
Canvas for 2D-visualization of peak map, feature map and consensus map data.
Definition: Plot2DCanvas.h:46
 
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:97
 
Main OpenMS namespace.
Definition: openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h:19
 
Index of a peak or feature.
Definition: PeakIndex.h:25